CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	96.27	89.74
CDX93284	Canola	cytosol, nucleus, plasma membrane	95.87	89.38
CDY44630	Canola	plasma membrane	89.19	82.7
AT2G39130.2	Thale cress	cytosol, nucleus, plasma membrane	88.8	82.18
CDX74865	Canola	plasma membrane	88.61	81.7
Solyc03g063030.2.1	Tomato	plasma membrane	33.4	72.34
CDX78269	Canola	plasma membrane	74.07	71.13
CDX73443	Canola	cytosol, nucleus, plasma membrane	74.46	70.58
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	75.25	68.03
KRG99573	Soybean	cytosol, nucleus, plasma membrane	14.15	67.29
KRG91942	Soybean	plasma membrane	70.92	66.36
KRH34828	Soybean	plasma membrane	70.14	63.64
Solyc11g008440.1.1	Tomato	cytosol, nucleus, plasma membrane	68.96	63.24
PGSC0003DMT400036273	Potato	cytosol, nucleus, plasma membrane	54.62	62.61
Solyc03g063040.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	15.13	62.6
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	67.19	60.75
GSMUA_Achr5P10650_001	Banana	cytosol, nucleus, plasma membrane	65.03	59.75
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	17.09	56.86
PGSC0003DMT400019190	Potato	cytosol, nucleus, plasma membrane	66.99	56.64
TraesCS2A01G052500.1	Wheat	plasma membrane	58.74	53.97
TraesCS2B01G065200.1	Wheat	cytosol, peroxisome, plasma membrane	58.74	53.68
TraesCSU01G023100.1	Wheat	cytosol, peroxisome, plasma membrane	58.55	53.5
Os04t0201800-00	Rice	plasma membrane, plastid	42.24	53.48
HORVU2Hr1G008090.4	Barley	cytosol, peroxisome, plasma membrane	58.55	53.02
Zm00001d004340_P002	Maize	plasma membrane	59.33	52.98
Zm00001d043640_P001	Maize	plasma membrane	17.29	52.07
Os02t0101000-01	Rice	cytosol, nucleus, plasma membrane	58.35	52.01
TraesCS6B01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	56.97	51.51
TraesCS6A01G002400.1	Wheat	cytosol, nucleus, plasma membrane	56.97	51.24
TraesCS6D01G003200.1	Wheat	cytosol, nucleus, plasma membrane	57.37	51.23
KRH38592	Soybean	endoplasmic reticulum	23.97	51.05
EES06091	Sorghum	plasma membrane	57.56	50.87
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	56.19	50.44
EER89806	Sorghum	cytosol, nucleus, plasma membrane	56.19	50.09
Solyc03g063050.1.1	Tomato	extracellular, plasma membrane	25.74	49.25
HORVU6Hr1G001480.1	Barley	plasma membrane	56.97	48.82
CDX73974	Canola	cytosol, nucleus, plasma membrane	37.13	46.21
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	47.74	46.2
CDY07919	Canola	cytosol, nucleus, plasma membrane	47.54	45.83
KXG25873	Sorghum	plasma membrane	59.14	45.74
CDY55126	Canola	plasma membrane	46.17	45.72
CDY40336	Canola	plasma membrane	48.33	44.97
CDY10463	Canola	plasma membrane	48.13	44.87
CDX73972	Canola	extracellular, plastid	11.2	43.51
CDY22507	Canola	plasma membrane	42.83	41.92
CDY35425	Canola	plasma membrane	42.83	41.92
CDY23868	Canola	cytosol, nucleus, plasma membrane	42.83	41.21
CDX79951	Canola	cytosol, nucleus, plasma membrane	42.63	41.02
CDY06942	Canola	cytosol, peroxisome, plasma membrane	42.83	40.82
CDY55127	Canola	cytosol, plasma membrane, plastid	46.76	40.75
CDX80808	Canola	plasma membrane	20.24	40.71
CDY67831	Canola	cytosol, peroxisome, plasma membrane	42.44	40.53
CDX80809	Canola	plasma membrane	46.56	39.97
CDX91000	Canola	plasma membrane	32.02	37.91
CDX85556	Canola	plasma membrane	31.63	37.53
CDX86397	Canola	plasma membrane	27.9	35.06
CDX85233	Canola	plasma membrane	27.9	35.06
CDY44419	Canola	plasma membrane	27.7	34.81
CDY38090	Canola	plasma membrane	25.15	29.56
CDY04048	Canola	plasma membrane	27.9	24.48
CDY08487	Canola	plasma membrane	19.84	24.22
CDY01068	Canola	plasma membrane	19.84	24.11
CDY21456	Canola	plasma membrane	18.66	23.57
CDY53922	Canola	plasma membrane	19.65	23.47
CDX73848	Canola	plasma membrane	19.65	23.47
CDY70145	Canola	plasma membrane	18.47	23.33
CDY47026	Canola	peroxisome, plastid	19.65	23.2
CDY42861	Canola	peroxisome	19.45	23.13
CDX85489	Canola	vacuole	19.45	22.92
CDY59097	Canola	plastid	19.65	22.57
CDY54797	Canola	plastid	19.65	22.47

Protein Annotations

EnsemblPlants:CDY18351	EnsemblPlantsGene:GSBRNA2T00005331001	GO:A0A078FZ76	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF240	PFAM:PF01490	ProteinID:CDY18351	ProteinID:CDY18351.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EF3539	UniProt:A0A078FZ76	MapMan:24.2.3.4.7	:

Description

BnaA04g22360DBnaA04g22360D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078FZ76]

Coordinates

chrLK032085:+:74..3414

Molecular Weight (calculated)

55617.1 Da

IEP (calculated)

7.464

GRAVY (calculated)

0.460

Length

509 amino acids

Sequence
(BLAST)

001: NKPNSYTTAW PQSYRQSIDL YSSVPSPSIG FLGNNSMTRF GSSFLSSSLI RRHTPESLPV VTKPLLEAEE QAPPPPKHRL SSHGLLPPVP SRRSSMRKDE
101: RVSHEVPMSR NSSYGQAVMN GLNVLCGVGI LSTPYAAKEG GWLGLGILFI YGLLSFYTGI LLRYCLDSES DLETYPDIGQ AAFGTTGRIF VSIVLYLELY
201: ACCVEYIILE SDNLSSLYPN AGLSIGGFEL DARHLFALLT TIAVLPTVWL RDLSLLSYIS AGGVIASVLV VLSLFWIGLV DDVGIHSKGT TLNLSTLPVA
301: IGLYGYCYSG HAVFPNIYTS MANPNQYPSA LLTCFTICTL MYAGVAFMGY TMFGEATESQ FTLNLPQDLV ATKIAVWTTV VNPFTKYPFQ ENYSAIILFY
401: LALSLEELIP SRHNKSHWYA IAIRTALVFS TLLVGLAIPF FGLVMSLIGS LLTMLVTLIL PPACFLSIVR RKVTRTQMML CVLIIVVGAI SSVIGSYSAL
501: SQIIEKLSS

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.