Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65990.1 | CDX84933 | AT1G27300.1 | 21798944 |
| AT5G65990.1 | CDY03907 | AT1G27300.1 | 21798944 |
| AT5G65990.1 | CDY15722 | AT1G27300.1 | 21798944 |
| AT5G65990.1 | CDY27605 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029326.1-P | Field mustard | peroxisome | 99.77 | 99.77 |
| CDY47026 | Canola | peroxisome, plastid | 98.6 | 97.91 |
| AT5G65990.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 89.49 | 89.7 |
| VIT_07s0031g02140.t01 | Wine grape | plasma membrane | 67.06 | 68.01 |
| CDY70145 | Canola | plasma membrane | 62.62 | 66.5 |
| CDY21456 | Canola | plasma membrane | 62.38 | 66.25 |
| PGSC0003DMT400045065 | Potato | plasma membrane, plastid | 64.72 | 65.8 |
| PGSC0003DMT400086252 | Potato | plasma membrane | 65.19 | 65.65 |
| Solyc02g082510.1.1 | Tomato | plasma membrane | 64.95 | 65.41 |
| Solyc03g032090.1.1 | Tomato | plasma membrane | 63.78 | 63.93 |
| PGSC0003DMT400048045 | Potato | plasma membrane | 63.32 | 63.47 |
| KRH28932 | Soybean | cytosol, plasma membrane | 51.87 | 61.67 |
| CDY54797 | Canola | plastid | 63.55 | 61.12 |
| CDY59097 | Canola | plastid | 63.08 | 60.95 |
| PGSC0003DMT400094217 | Potato | plasma membrane | 58.41 | 59.24 |
| KRH39423 | Soybean | plasma membrane | 59.11 | 59.11 |
| GSMUA_Achr1P02810_001 | Banana | cytosol, plasma membrane, vacuole | 53.27 | 57.87 |
| GSMUA_Achr5P11060_001 | Banana | plasma membrane | 53.04 | 57.32 |
| EES07473 | Sorghum | plasma membrane | 57.01 | 57.28 |
| Os04t0565500-01 | Rice | cytosol, plasma membrane, plastid | 56.54 | 56.94 |
| Solyc02g082520.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 55.14 | 56.32 |
| TraesCS2D01G400900.1 | Wheat | plasma membrane | 55.61 | 56.26 |
| TraesCS2B01G421800.1 | Wheat | plasma membrane | 55.61 | 56.26 |
| Zm00001d017557_P001 | Maize | plastid | 56.78 | 56.25 |
| TraesCS2A01G403800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 55.14 | 55.79 |
| GSMUA_Achr4P25490_001 | Banana | plasma membrane | 50.93 | 55.61 |
| TraesCS6B01G271500.1 | Wheat | plasma membrane | 54.44 | 55.34 |
| TraesCS6A01G254100.1 | Wheat | plasma membrane | 54.21 | 55.11 |
| TraesCS6D01G235500.1 | Wheat | plasma membrane | 53.97 | 54.87 |
| HORVU6Hr1G064740.1 | Barley | plasma membrane | 53.74 | 54.63 |
| GSMUA_AchrUn_... | Banana | plasma membrane, plastid, vacuole | 53.27 | 54.55 |
| OQU82139 | Sorghum | peroxisome | 54.21 | 54.08 |
| Os02t0670900-02 | Rice | endoplasmic reticulum, plasma membrane, plastid | 56.78 | 49.9 |
| EES12671 | Sorghum | plastid | 57.24 | 49.4 |
| Zm00001d026121_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 56.78 | 49.09 |
| CDY01068 | Canola | plasma membrane | 34.35 | 35.08 |
| CDY08487 | Canola | plasma membrane | 34.11 | 35.01 |
| CDY53922 | Canola | plasma membrane | 34.58 | 34.74 |
| CDX73848 | Canola | plasma membrane | 34.35 | 34.51 |
| CDX73972 | Canola | extracellular, plastid | 8.18 | 26.72 |
| CDX86397 | Canola | plasma membrane | 21.73 | 22.96 |
| CDX85233 | Canola | plasma membrane | 21.73 | 22.96 |
| CDY44419 | Canola | plasma membrane | 21.73 | 22.96 |
| CDX85556 | Canola | plasma membrane | 20.79 | 20.75 |
| CDX91000 | Canola | plasma membrane | 20.79 | 20.7 |
| CDY07919 | Canola | cytosol, nucleus, plasma membrane | 24.77 | 20.08 |
| CDY55126 | Canola | plasma membrane | 23.36 | 19.46 |
| CDY18351 | Canola | plastid | 23.13 | 19.45 |
| CDX78269 | Canola | plasma membrane | 23.6 | 19.06 |
| CDX73443 | Canola | cytosol, nucleus, plasma membrane | 23.83 | 18.99 |
| CDY23868 | Canola | cytosol, nucleus, plasma membrane | 23.13 | 18.71 |
| CDX79951 | Canola | cytosol, nucleus, plasma membrane | 22.9 | 18.53 |
| CDX93284 | Canola | cytosol, nucleus, plasma membrane | 23.6 | 18.5 |
| CDX74865 | Canola | plasma membrane | 23.83 | 18.48 |
| CDY38090 | Canola | plasma membrane | 18.69 | 18.48 |
| CDY44630 | Canola | plasma membrane | 23.6 | 18.4 |
| CDY22507 | Canola | plasma membrane | 22.2 | 18.27 |
| CDY35425 | Canola | plasma membrane | 22.2 | 18.27 |
| CDY55127 | Canola | cytosol, plasma membrane, plastid | 24.77 | 18.15 |
| CDY67831 | Canola | cytosol, peroxisome, plasma membrane | 22.2 | 17.82 |
| CDY06942 | Canola | cytosol, peroxisome, plasma membrane | 22.2 | 17.79 |
| CDY40336 | Canola | plasma membrane | 22.66 | 17.73 |
| CDY10463 | Canola | plasma membrane | 22.2 | 17.4 |
| CDX80808 | Canola | plasma membrane | 10.28 | 17.39 |
| CDX80809 | Canola | plasma membrane | 24.07 | 17.37 |
| CDX73974 | Canola | cytosol, nucleus, plasma membrane | 16.59 | 17.36 |
| CDY04048 | Canola | plasma membrane | 21.26 | 15.69 |
| CDX85489 | Canola | vacuole | 15.42 | 15.28 |
Protein Annotations
| EnsemblPlants:CDY42861 | EnsemblPlantsGene:GSBRNA2T00075557001 | GO:A0A078HYX3 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF464 | PFAM:PF01490 | ProteinID:CDY42861 | ProteinID:CDY42861.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDFA6B | UniProt:A0A078HYX3 | MapMan:24.2.3.4.4 | : |
Description
BnaAnng06860DBnaAnng06860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYX3]
Coordinates
chrLK032536:-:175653..178025
Molecular Weight (calculated)
46498.8 Da
IEP (calculated)
7.365
GRAVY (calculated)
0.792
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLEYDQDSG SSTHSLRSSS NSLYVPREDT PLLGPRTLSS QPKTFANVFI AIVGAGVLGL PYTFKKTGWL LGLLTLFFVS SLTFFCMMLL VRTRRKLESL
101: SGFSSITSFG DLGEAVCGPA GRLVVDVMLV LSQAGFCVSY LIFVATTMAN LLSRGTEVIL GLDPSSVYMW GCFPFQLGLN SIPTLTHLAP LSIFADVVDV
201: AATLVVMVQD VFIFVKKRPP LRVFGGFSVF FYGLGVAVYA FEGIGMVLPL ELEAKYKDKF GRALGLAMGL ISIMYGAFGL LGYMAYGDET KDIITTNLGA
301: GLVSTLVQLG LAINLFFTFP LMMHPVYEVI ERRLCSSSYS IWVRWSTVLV VTLVALLVPN FADFLSLVGS SVCVVLGFVL PSLFHLQAFK EELSFARKVV
401: DVVIFLIGVM IAVTGTWTAV IEIMTSKA
101: SGFSSITSFG DLGEAVCGPA GRLVVDVMLV LSQAGFCVSY LIFVATTMAN LLSRGTEVIL GLDPSSVYMW GCFPFQLGLN SIPTLTHLAP LSIFADVVDV
201: AATLVVMVQD VFIFVKKRPP LRVFGGFSVF FYGLGVAVYA FEGIGMVLPL ELEAKYKDKF GRALGLAMGL ISIMYGAFGL LGYMAYGDET KDIITTNLGA
301: GLVSTLVQLG LAINLFFTFP LMMHPVYEVI ERRLCSSSYS IWVRWSTVLV VTLVALLVPN FADFLSLVGS SVCVVLGFVL PSLFHLQAFK EELSFARKVV
401: DVVIFLIGVM IAVTGTWTAV IEIMTSKA
001: MRYDQEAGSS SHSLPSGSSS HSLPPTEDTP LLGPRTLSSQ PKTFANVFIA IVGAGVLGLP YTFKKTGWLL GLLTLLFVSS LTFFCMMLLV HTRRKLESLS
101: GFNSITSFGD LGESVCGPAG RLVVDVMLVL SQSGFCVSYL IFVATTMANL LSRGTEHILG LDAASIYLWG CFPFQLGLNS IPSLTHLAPL SIFADIVDVA
201: ATLVVMVQDV FIFLKRRPPL RVFGGVSVFF YGLGVAVYAF EGIGMVLPLE LEAKYKDKFG RALGLAMGLI SIMYGAFGLL GYMAYGEETK DIITTNLGTG
301: VVSTLVQLGL AINLFFTFPL MMQPVYEVVE RRLCSSRYSV WVRWATVLVV TLVALLVPNF ADFLSLVGSS VCVVLGFVLP SLFHLQAFKN ELSITRIVVD
401: VLVFLIGVMI AITGTWTAVH EILTSKA
101: GFNSITSFGD LGESVCGPAG RLVVDVMLVL SQSGFCVSYL IFVATTMANL LSRGTEHILG LDAASIYLWG CFPFQLGLNS IPSLTHLAPL SIFADIVDVA
201: ATLVVMVQDV FIFLKRRPPL RVFGGVSVFF YGLGVAVYAF EGIGMVLPLE LEAKYKDKFG RALGLAMGLI SIMYGAFGLL GYMAYGEETK DIITTNLGTG
301: VVSTLVQLGL AINLFFTFPL MMQPVYEVVE RRLCSSRYSV WVRWATVLVV TLVALLVPNF ADFLSLVGSS VCVVLGFVLP SLFHLQAFKN ELSITRIVVD
401: VLVFLIGVMI AITGTWTAVH EILTSKA
Arabidopsis Description
AVT3AAmino acid transporter AVT3A [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY3]
SUBAcon: [plasma membrane,endoplasmic reticulum,peroxisome,plastid]
SUBAcon: [plasma membrane,endoplasmic reticulum,peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.