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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 2
  • peroxisome 2
  • golgi 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
MultiLoc:peroxisome
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65990.1 Bra030034.1-P AT1G27300.1 21798944
AT5G65990.1 Bra032817.1-P AT1G27300.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42861 Canola peroxisome 99.77 99.77
CDY47026 Canola peroxisome, plastid 98.36 97.68
AT5G65990.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane, plastid 89.25 89.46
VIT_07s0031g02140.t01 Wine grape plasma membrane 66.82 67.77
PGSC0003DMT400045065 Potato plasma membrane, plastid 64.72 65.8
Bra000591.1-P Field mustard plasma membrane 61.92 65.59
PGSC0003DMT400086252 Potato plasma membrane 64.95 65.41
Solyc02g082510.1.1 Tomato plasma membrane 64.72 65.18
Solyc03g032090.1.1 Tomato plasma membrane 63.78 63.93
PGSC0003DMT400048045 Potato plasma membrane 63.32 63.47
KRH28932 Soybean cytosol, plasma membrane 52.1 61.94
Bra033558.1-P Field mustard plasma membrane 51.64 61.73
PGSC0003DMT400094217 Potato plasma membrane 58.41 59.24
KRH39423 Soybean plasma membrane 58.88 58.88
GSMUA_Achr1P02810_001 Banana cytosol, plasma membrane, vacuole 53.5 58.12
GSMUA_Achr5P11060_001 Banana plasma membrane 53.27 57.58
EES07473 Sorghum plasma membrane 57.24 57.51
Os04t0565500-01 Rice cytosol, plasma membrane, plastid 56.54 56.94
Zm00001d017557_P001 Maize plastid 57.01 56.48
Solyc02g082520.1.1 Tomato cytosol, peroxisome, plasma membrane 55.14 56.32
TraesCS2D01G400900.1 Wheat plasma membrane 55.61 56.26
TraesCS2B01G421800.1 Wheat plasma membrane 55.61 56.26
GSMUA_Achr4P25490_001 Banana plasma membrane 51.17 55.87
TraesCS2A01G403800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 55.14 55.79
TraesCS6B01G271500.1 Wheat plasma membrane 54.67 55.58
TraesCS6A01G254100.1 Wheat plasma membrane 54.44 55.34
TraesCS6D01G235500.1 Wheat plasma membrane 54.21 55.11
HORVU6Hr1G064740.1 Barley plasma membrane 53.97 54.87
GSMUA_AchrUn_... Banana plasma membrane, plastid, vacuole 53.27 54.55
OQU82139 Sorghum peroxisome 54.44 54.31
Os02t0670900-02 Rice endoplasmic reticulum, plasma membrane, plastid 57.01 50.1
EES12671 Sorghum plastid 57.48 49.6
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 57.01 49.29
Bra001425.1-P Field mustard plasma membrane 34.35 34.51
Bra034803.1-P Field mustard plasma membrane 34.35 34.43
Bra007103.1-P Field mustard plasma membrane 21.96 23.86
Bra033075.1-P Field mustard plasma membrane 21.73 22.96
Bra025369.1-P Field mustard plasma membrane 21.73 22.96
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 24.77 20.08
Bra005712.1-P Field mustard plasma membrane 23.36 19.92
Bra004605.1-P Field mustard cytosol, nucleus, plasma membrane 22.9 18.53
Bra017088.1-P Field mustard cytosol, nucleus, plasma membrane 23.6 18.5
Bra000217.1-P Field mustard plasma membrane 22.2 18.27
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 19.39 18.0
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 22.2 17.79
Bra009608.1-P Field mustard plasma membrane 22.43 17.55
Bra023581.1-P Field mustard plasma membrane 12.38 16.83
Protein Annotations
MapMan:24.2.3.4.4InterPro:AA_transpt_TMEnsemblPlantsGene:Bra029326EnsemblPlants:Bra029326.1EnsemblPlants:Bra029326.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0015173GO:GO:0015175GO:GO:0015801
GO:GO:0015804GO:GO:0016020GO:GO:0016021UniProt:M4EKK9PFAM:PF01490PANTHER:PTHR22950
PANTHER:PTHR22950:SF464TMHMM:TMhelixUniParc:UPI00025459ACSEG:seg::
Description
AT5G65990 (E=8e-171) | amino acid transporter family protein
Coordinates
chrA02:-:25853364..25855503
Molecular Weight (calculated)
46512.8 Da
IEP (calculated)
7.365
GRAVY (calculated)
0.797
Length
428 amino acids
Sequence
(BLAST)
001: MGLEYDQDSG SSTHSLRSSS NSLYVPREDT PLLGPRTLSS QPKTFANVFI AIVGAGVLGL PYTFKKTGWL LGLLTLFFVS SLTFFCMMLL VRTRRKLESL
101: SGFSSITSFG DLGEAVCGPA GRLVVDVMLV LSQAGFCVSY LIFVATTMAN LLSRGTEVIL GLDPSSVYMW ACFPFQLGLN SIPTLTHLAP LSIFADVVDV
201: AATLVVMVQD VFIFVKKRPP LRVFGGFSVF FYGLGVAVYA FEGIGMVLPL ELEAKYKDKF GRALGLAMGL ISIMYGAFGL LGYMAYGDET KDIITTNLGA
301: GLVSTLVQLG LAINLFFTFP LMMHPVYEVI ERRLCSSSYS IWVRWSTVLV VTLVALLVPN FADFLSLVGS SVCVVLGFVL PSLFHLQAFK EELSFARKVV
401: DVVIFLIGVM IAVTGTWTAV IEIMTSKA
Best Arabidopsis Sequence Match ( AT5G65990.1 )
(BLAST)
001: MRYDQEAGSS SHSLPSGSSS HSLPPTEDTP LLGPRTLSSQ PKTFANVFIA IVGAGVLGLP YTFKKTGWLL GLLTLLFVSS LTFFCMMLLV HTRRKLESLS
101: GFNSITSFGD LGESVCGPAG RLVVDVMLVL SQSGFCVSYL IFVATTMANL LSRGTEHILG LDAASIYLWG CFPFQLGLNS IPSLTHLAPL SIFADIVDVA
201: ATLVVMVQDV FIFLKRRPPL RVFGGVSVFF YGLGVAVYAF EGIGMVLPLE LEAKYKDKFG RALGLAMGLI SIMYGAFGLL GYMAYGEETK DIITTNLGTG
301: VVSTLVQLGL AINLFFTFPL MMQPVYEVVE RRLCSSRYSV WVRWATVLVV TLVALLVPNF ADFLSLVGSS VCVVLGFVLP SLFHLQAFKN ELSITRIVVD
401: VLVFLIGVMI AITGTWTAVH EILTSKA
Arabidopsis Description
AVT3AAmino acid transporter AVT3A [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY3]
SUBAcon: [plasma membrane,endoplasmic reticulum,peroxisome,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.