Factsheet for AT5G65990.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane, peroxisome

Predictor Summary:

plastid 2
peroxisome 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42861	Canola	peroxisome	89.7	89.49
Bra029326.1-P	Field mustard	peroxisome	89.46	89.25
CDY47026	Canola	peroxisome, plastid	89.7	88.86
VIT_07s0031g02140.t01	Wine grape	plasma membrane	66.04	66.82
PGSC0003DMT400086252	Potato	plasma membrane	65.57	65.88
Solyc02g082510.1.1	Tomato	plasma membrane	65.11	65.41
PGSC0003DMT400045065	Potato	plasma membrane, plastid	64.4	65.32
AT2G42005.1	Thale cress	plasma membrane	61.12	63.2
KRH28932	Soybean	cytosol, plasma membrane	52.69	62.5
Solyc03g032090.1.1	Tomato	plasma membrane	62.3	62.3
PGSC0003DMT400048045	Potato	plasma membrane	62.06	62.06
AT4G38250.1	Thale cress	plasma membrane	62.53	61.24
KRH39423	Soybean	plasma membrane	59.48	59.35
PGSC0003DMT400094217	Potato	plasma membrane	57.85	58.53
Os04t0565500-01	Rice	cytosol, plasma membrane, plastid	58.08	58.35
GSMUA_Achr1P02810_001	Banana	cytosol, plasma membrane, vacuole	53.4	57.87
TraesCS2B01G421800.1	Wheat	plasma membrane	56.67	57.21
TraesCS2D01G400900.1	Wheat	plasma membrane	56.67	57.21
GSMUA_Achr5P11060_001	Banana	plasma membrane	52.69	56.82
TraesCS2A01G403800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	56.21	56.74
GSMUA_Achr4P25490_001	Banana	plasma membrane	51.76	56.38
EES07473	Sorghum	plasma membrane	55.97	56.1
Solyc02g082520.1.1	Tomato	cytosol, peroxisome, plasma membrane	55.04	56.09
OQU82139	Sorghum	peroxisome	55.97	55.71
TraesCS6B01G271500.1	Wheat	plasma membrane	54.8	55.58
Zm00001d017557_P001	Maize	plastid	56.21	55.56
TraesCS6A01G254100.1	Wheat	plasma membrane	54.57	55.34
GSMUA_AchrUn_...	Banana	plasma membrane, plastid, vacuole	54.1	55.26
TraesCS6D01G235500.1	Wheat	plasma membrane	54.33	55.11
HORVU6Hr1G064740.1	Barley	plasma membrane	53.86	54.63
EES12671	Sorghum	plastid	58.55	50.4
Os02t0670900-02	Rice	endoplasmic reticulum, plasma membrane, plastid	56.91	49.9
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	57.14	49.29
AT3G11900.2	Thale cress	plasma membrane	33.26	32.87
AT3G28960.2	Thale cress	plasma membrane	20.84	21.98
AT5G15240.1	Thale cress	plasma membrane	21.08	21.28
AT5G16740.1	Thale cress	plasma membrane	19.44	19.48
AT3G09340.1	Thale cress	plasma membrane	23.18	18.75
AT3G09330.1	Thale cress	cytosol, nucleus, plasma membrane	22.95	18.7
AT2G39130.2	Thale cress	cytosol, nucleus, plasma membrane	23.65	18.36
AT5G02180.1	Thale cress	plasma membrane	23.42	18.18
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	22.72	18.1
AT5G02170.1	Thale cress	plasma membrane	22.01	17.87
AT3G54830.1	Thale cress	nucleus	20.61	16.12

Protein Annotations

MapMan:24.2.3.4.4	EntrezGene:836729	UniProt:A0A178ULW2	InterPro:AA_transpt_TM	ProteinID:AED98135.1	ArrayExpress:AT5G65990
EnsemblPlantsGene:AT5G65990	RefSeq:AT5G65990	TAIR:AT5G65990	RefSeq:AT5G65990-TAIR-G	EnsemblPlants:AT5G65990.1	TAIR:AT5G65990.1
Unigene:At.49231	ProteinID:BAB10404.1	EMBL:BT011236	EMBL:BT026486	GO:GO:0003333	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0006810	GO:GO:0006865	GO:GO:0008150	GO:GO:0015171	GO:GO:0015173
GO:GO:0015175	GO:GO:0015801	GO:GO:0015804	GO:GO:0016020	GO:GO:0016021	RefSeq:NP_201400.1
ProteinID:OAO94044.1	PFAM:PF01490	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR22950	PANTHER:PTHR22950:SF464	UniProt:Q9FKY3
TMHMM:TMhelix	UniParc:UPI0000048CEE	SEG:seg	:	:	:

Description

AVT3AAmino acid transporter AVT3A [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY3]

Coordinates

chr5:+:26394823..26396513

Molecular Weight (calculated)

46251.5 Da

IEP (calculated)

7.496

GRAVY (calculated)

0.777

Length

427 amino acids

Sequence
(BLAST)

001: MRYDQEAGSS SHSLPSGSSS HSLPPTEDTP LLGPRTLSSQ PKTFANVFIA IVGAGVLGLP YTFKKTGWLL GLLTLLFVSS LTFFCMMLLV HTRRKLESLS
101: GFNSITSFGD LGESVCGPAG RLVVDVMLVL SQSGFCVSYL IFVATTMANL LSRGTEHILG LDAASIYLWG CFPFQLGLNS IPSLTHLAPL SIFADIVDVA
201: ATLVVMVQDV FIFLKRRPPL RVFGGVSVFF YGLGVAVYAF EGIGMVLPLE LEAKYKDKFG RALGLAMGLI SIMYGAFGLL GYMAYGEETK DIITTNLGTG
301: VVSTLVQLGL AINLFFTFPL MMQPVYEVVE RRLCSSRYSV WVRWATVLVV TLVALLVPNF ADFLSLVGSS VCVVLGFVLP SLFHLQAFKN ELSITRIVVD
401: VLVFLIGVMI AITGTWTAVH EILTSKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.