Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016570_P001 | |
| Zm00001d050563_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65990.1 | Zm00001d016570_P001 | AT1G27300.1 | 21798944 |
| AT5G65990.1 | Zm00001d050563_P001 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07473 | Sorghum | plasma membrane | 93.75 | 95.07 |
| HORVU6Hr1G064740.1 | Barley | plasma membrane | 83.8 | 85.99 |
| TraesCS6B01G271500.1 | Wheat | plasma membrane | 83.33 | 85.51 |
| TraesCS6A01G254100.1 | Wheat | plasma membrane | 83.33 | 85.51 |
| TraesCS6D01G235500.1 | Wheat | plasma membrane | 83.1 | 85.27 |
| Os02t0670900-02 | Rice | endoplasmic reticulum, plasma membrane, plastid | 87.04 | 77.21 |
| GSMUA_Achr1P02810_001 | Banana | cytosol, plasma membrane, vacuole | 63.19 | 69.29 |
| Zm00001d026121_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 78.24 | 68.28 |
| GSMUA_Achr5P11060_001 | Banana | plasma membrane | 60.42 | 65.91 |
| GSMUA_Achr4P25490_001 | Banana | plasma membrane | 57.41 | 63.27 |
| GSMUA_AchrUn_... | Banana | plasma membrane, plastid, vacuole | 60.42 | 62.44 |
| PGSC0003DMT400045065 | Potato | plasma membrane, plastid | 59.95 | 61.52 |
| VIT_07s0031g02140.t01 | Wine grape | plasma membrane | 59.95 | 61.37 |
| CDY70145 | Canola | plasma membrane | 57.18 | 61.29 |
| VIT_03s0038g03900.t01 | Wine grape | plasma membrane | 60.42 | 61.27 |
| CDY21456 | Canola | plasma membrane | 56.94 | 61.04 |
| AT2G42005.1 | Thale cress | plasma membrane | 58.1 | 60.77 |
| Bra000591.1-P | Field mustard | plasma membrane | 56.71 | 60.64 |
| Solyc02g082510.1.1 | Tomato | plasma membrane | 59.26 | 60.24 |
| PGSC0003DMT400086252 | Potato | plasma membrane | 59.26 | 60.24 |
| PGSC0003DMT400048045 | Potato | plasma membrane | 57.87 | 58.55 |
| Solyc03g032090.1.1 | Tomato | plasma membrane | 57.64 | 58.31 |
| AT4G38250.1 | Thale cress | plasma membrane | 58.33 | 57.8 |
| PGSC0003DMT400094217 | Potato | plasma membrane | 56.25 | 57.58 |
| Bra029326.1-P | Field mustard | peroxisome | 56.48 | 57.01 |
| CDY42861 | Canola | peroxisome | 56.25 | 56.78 |
| CDY59097 | Canola | plastid | 58.1 | 56.66 |
| AT5G65990.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 55.56 | 56.21 |
| CDY47026 | Canola | peroxisome, plastid | 56.02 | 56.15 |
| CDY54797 | Canola | plastid | 57.64 | 55.96 |
| Bra033558.1-P | Field mustard | plasma membrane | 46.3 | 55.87 |
| KRH39423 | Soybean | plasma membrane | 55.32 | 55.84 |
| Solyc02g082520.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 51.16 | 52.74 |
| KRH28932 | Soybean | cytosol, plasma membrane | 43.52 | 52.22 |
| Solyc10g048180.1.1 | Tomato | plasma membrane | 51.39 | 51.99 |
| PGSC0003DMT400033422 | Potato | plasma membrane | 51.62 | 51.62 |
| Zm00001d019225_P001 | Maize | plasma membrane | 37.96 | 38.32 |
| Zm00001d044994_P001 | Maize | cytosol, plasma membrane, vacuole | 9.49 | 26.8 |
| Zm00001d003422_P001 | Maize | cytosol, plasma membrane, vacuole | 24.77 | 23.36 |
| Zm00001d037229_P001 | Maize | plasma membrane | 20.37 | 22.06 |
| Zm00001d031629_P001 | Maize | cytosol, plasma membrane, vacuole | 8.8 | 21.11 |
| Zm00001d032325_P001 | Maize | mitochondrion, plasma membrane, vacuole | 12.73 | 20.37 |
| Zm00001d018340_P001 | Maize | cytosol, peroxisome, plasma membrane | 24.07 | 19.7 |
| Zm00001d018336_P002 | Maize | plasma membrane | 23.38 | 18.46 |
| Zm00001d043640_P001 | Maize | plasma membrane | 7.18 | 18.34 |
| Zm00001d004633_P001 | Maize | plasma membrane | 19.44 | 18.1 |
| Zm00001d048577_P001 | Maize | cytosol, nucleus, plasma membrane | 23.38 | 17.81 |
| Zm00001d052063_P003 | Maize | plasma membrane | 22.22 | 17.78 |
| Zm00001d004340_P002 | Maize | plasma membrane | 23.15 | 17.54 |
| Zm00001d041534_P002 | Maize | plasma membrane | 22.45 | 15.93 |
| Zm00001d030751_P001 | Maize | plasma membrane | 22.92 | 15.66 |
| Zm00001d037057_P001 | Maize | cytosol, nucleus, plasma membrane | 18.75 | 15.4 |
| Zm00001d044387_P001 | Maize | nucleus | 23.84 | 12.03 |
Protein Annotations
| EMBL:EU963484 | EnsemblPlants:Zm00001d017557_P001 | EnsemblPlants:Zm00001d017557_T001 | EnsemblPlantsGene:Zm00001d017557 | EntrezGene:100274361 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF259 | PFAM:PF01490 |
| ProteinID:AQK73441.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000182D711 | UniProt:B6TER9 | MapMan:24.2.3.4.4 |
Description
Amino acid transporter ANTL2
Coordinates
chr5:+:199518262..199519560
Molecular Weight (calculated)
45480.3 Da
IEP (calculated)
7.460
GRAVY (calculated)
0.842
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFGMGNNNN GASSSSSRLD PAAPLLPRHG SSGGREGGGL SSQPKTFANV FIAVVGAGVL GLPYTFSRTG WAAGSLLLFS VAALTFYCMM LLVACRRRLA
101: DEHPKIASFG DLGDAVFGAH GRFAVDVMLV LSQFSFCVGY LIFISNTMAH LYPITAAASS SSALLSPKAL VIWAMLPFQL GLNSIKTLTL LAPLSIFADV
201: VDLGAMGVVL GQDVAAWLAK PVPVVAFGGA GALLYGLGVS VYAFEGIGMV LPLEAEAANK SKFGVTLGLS MAFIAVMYGL FGVMGYVAFG DATRDIITTN
301: LGAGWLSAAV QLGLCINLFF TMPVMMNPVY EVAERLLHGK RYCWWLRWLL VVVVGLAAMY VPNFTDFLAL VGSSVCVLLG FVLPASFHLK VFGAEMEWPG
401: VLSDVLLVVI GLALAVFGTY TSLLQIFQSS SA
101: DEHPKIASFG DLGDAVFGAH GRFAVDVMLV LSQFSFCVGY LIFISNTMAH LYPITAAASS SSALLSPKAL VIWAMLPFQL GLNSIKTLTL LAPLSIFADV
201: VDLGAMGVVL GQDVAAWLAK PVPVVAFGGA GALLYGLGVS VYAFEGIGMV LPLEAEAANK SKFGVTLGLS MAFIAVMYGL FGVMGYVAFG DATRDIITTN
301: LGAGWLSAAV QLGLCINLFF TMPVMMNPVY EVAERLLHGK RYCWWLRWLL VVVVGLAAMY VPNFTDFLAL VGSSVCVLLG FVLPASFHLK VFGAEMEWPG
401: VLSDVLLVVI GLALAVFGTY TSLLQIFQSS SA
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.