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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d044994_P001 Maize cytosol, plasma membrane, vacuole 49.11 54.25
Solyc03g063030.2.1 Tomato plasma membrane 35.5 25.53
EER89806 Sorghum cytosol, nucleus, plasma membrane 82.84 24.52
Solyc03g063040.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 17.16 23.58
Zm00001d048577_P001 Maize cytosol, nucleus, plasma membrane 78.7 23.46
Bra007103.1-P Field mustard plasma membrane 53.25 22.84
TraesCS6B01G007400.1 Wheat cytosol, peroxisome, plasma membrane 74.56 22.38
TraesCS6D01G003200.1 Wheat cytosol, nucleus, plasma membrane 74.56 22.11
TraesCS6A01G002400.1 Wheat cytosol, nucleus, plasma membrane 73.96 22.08
Zm00001d037057_P001 Maize cytosol, nucleus, plasma membrane 66.27 21.29
HORVU6Hr1G001480.1 Barley plasma membrane 73.37 20.88
Zm00001d004340_P002 Maize plasma membrane 69.23 20.53
CDX78269 Canola plasma membrane 55.03 17.55
CDX73443 Canola cytosol, nucleus, plasma membrane 55.03 17.32
CDY18351 Canola plastid 52.07 17.29
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 45.56 16.7
GSMUA_Achr1P03170_001 Banana cytosol, nucleus, plasma membrane 55.62 16.7
Zm00001d031629_P001 Maize cytosol, plasma membrane, vacuole 17.75 16.67
GSMUA_Achr5P10650_001 Banana cytosol, nucleus, plasma membrane 54.44 16.61
Solyc11g008440.1.1 Tomato cytosol, nucleus, plasma membrane 54.44 16.58
CDY44630 Canola plasma membrane 53.25 16.39
CDX93284 Canola cytosol, nucleus, plasma membrane 52.66 16.3
Bra017088.1-P Field mustard cytosol, nucleus, plasma membrane 52.66 16.3
CDX74865 Canola plasma membrane 52.07 15.94
VIT_13s0019g04660.t01 Wine grape cytosol, nucleus, plasma membrane 52.66 15.81
Zm00001d037229_P001 Maize plasma membrane 36.69 15.54
AT2G39130.2 Thale cress cytosol, nucleus, plasma membrane 50.3 15.45
PGSC0003DMT400036273 Potato cytosol, nucleus, plasma membrane 37.87 14.41
PGSC0003DMT400019190 Potato cytosol, nucleus, plasma membrane 49.11 13.79
Zm00001d018336_P002 Maize plasma membrane 44.38 13.71
Zm00001d052063_P003 Maize plasma membrane 43.79 13.7
Zm00001d003422_P001 Maize cytosol, plasma membrane, vacuole 36.69 13.54
Zm00001d041534_P002 Maize plasma membrane 47.34 13.14
Zm00001d018340_P001 Maize cytosol, peroxisome, plasma membrane 40.24 12.88
Zm00001d030751_P001 Maize plasma membrane 46.75 12.5
AT3G54830.1 Thale cress nucleus 39.05 12.09
Zm00001d004633_P001 Maize plasma membrane 31.95 11.64
KRG99991 Soybean cytosol, nucleus, peroxisome 18.34 10.88
Zm00001d019225_P001 Maize plasma membrane 21.89 8.64
Zm00001d032325_P001 Maize mitochondrion, plasma membrane, vacuole 13.61 8.52
Zm00001d017557_P001 Maize plastid 18.34 7.18
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 20.71 7.07
Zm00001d044387_P001 Maize nucleus 34.32 6.78
Solyc03g063050.1.1 Tomato extracellular, plasma membrane 1.78 1.13
Protein Annotations
EnsemblPlants:Zm00001d043640_P001EnsemblPlants:Zm00001d043640_T001EnsemblPlantsGene:Zm00001d043640GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF240PFAM:PF01490ProteinID:ONM38626.1TMHMM:TMhelix
UniParc:UPI000844EE2DUniProt:A0A1D6NDR1MapMan:35.1:::
Description
Transmembrane amino acid transporter family protein
Coordinates
chr3:+:205804373..205807066
Molecular Weight (calculated)
18404.5 Da
IEP (calculated)
8.712
GRAVY (calculated)
0.572
Length
169 amino acids
Sequence
(BLAST)
001: MARKSWKASE TQNSGTALNA PGIPIAIGLY LYGYCYSGHG VFPNIYSSLK IRNQFPSILF TCTHICFLFL VSIGLSTFLY AGAAVTGYKM FGEATESQFT
101: LNLPDNSVIS KIAVWTTTYI LPCACFLAIL KTKVGWHQIA ACSFIIVVGV CCAYVGTYSS LSKIIQNYA
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.