Factsheet for Zm00001d044387_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	46.73	90.29
Os01t0597600-01	Rice	peroxisome, plasma membrane, vacuole	39.6	79.95
TraesCS4B01G285800.1	Wheat	peroxisome, plasma membrane, vacuole	38.55	76.57
TraesCS4B01G285500.1	Wheat	plasma membrane	38.55	76.57
TraesCS4D01G284600.1	Wheat	peroxisome, plasma membrane, vacuole	38.55	76.39
TraesCS4A01G018500.1	Wheat	peroxisome, plasma membrane, vacuole	38.43	76.33
TraesCS4A01G018400.1	Wheat	peroxisome, plasma membrane, vacuole	37.97	75.41
TraesCS4A01G018300.1	Wheat	peroxisome, plasma membrane, vacuole	35.16	74.14
TraesCS4D01G284500.1	Wheat	plasma membrane	29.67	69.02
GSMUA_Achr6P35440_001	Banana	plasma membrane	26.17	51.49
VIT_01s0026g02500.t01	Wine grape	plasma membrane	24.65	51.34
Zm00001d003422_P001	Maize	cytosol, plasma membrane, vacuole	25.7	48.03
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	9.58	47.95
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	8.29	47.33
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	11.45	46.67
Solyc05g053970.2.1	Tomato	plasma membrane	19.04	46.31
Zm00001d037229_P001	Maize	plasma membrane	21.5	46.12
KRG89633	Soybean	plasma membrane	20.56	43.24
Solyc06g061260.1.1	Tomato	plasma membrane	9.46	41.97
PGSC0003DMT400082135	Potato	plasma membrane	4.79	40.2
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	6.66	37.25
Zm00001d043640_P001	Maize	plasma membrane	6.78	34.32
Zm00001d004633_P001	Maize	plasma membrane	16.0	29.53
Zm00001d052063_P003	Maize	plasma membrane	18.57	29.44
Zm00001d018336_P002	Maize	plasma membrane	18.81	29.43
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	18.11	29.36
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	19.39	29.28
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	9.23	29.26
Zm00001d004340_P002	Maize	plasma membrane	19.39	29.12
Zm00001d041534_P002	Maize	plasma membrane	17.64	24.79
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	15.19	24.71
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	5.14	24.44
Zm00001d017557_P001	Maize	plastid	12.03	23.84
Zm00001d019225_P001	Maize	plasma membrane	11.8	23.6
Zm00001d030751_P001	Maize	plasma membrane	17.41	23.58
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	12.03	20.81

Protein Annotations

EnsemblPlants:Zm00001d044387_P001	EnsemblPlants:Zm00001d044387_T001	EnsemblPlantsGene:Zm00001d044387	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF297	PFAM:PF01490	ProteinID:ONM41021.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0008424398	UniProt:A0A1D6NLC0	MapMan:24.2.3.4.7	:	:

Description

Transmembrane amino acid transporter family protein

Coordinates

chr3:+:226714841..226734363

Molecular Weight (calculated)

91167.3 Da

IEP (calculated)

8.542

GRAVY (calculated)

0.709

Length

856 amino acids

Sequence
(BLAST)

001: MESQNTCEEV LPVSTLSEPL LPGKADDDDD LEVQLTPYDR RATATATGAS SFSRTCLNLT NAVSGIGVLS MPYAVAQGGW LSLALFALVG AVCYYTGTLI
101: ERCMRADPGA IASYPDIGKF AFGSAGRRAV AFFMYVELYL VAISFLVLEG DNLDKLFPGS SVRLAGDYRL QGKQLFIALA AAVVLPTTWL KSLGVLAYVS
201: AVGLVASAVL TASLVWAGVS ETGFRRNSTS VLSLSGLPTS LGLYFVCFTG HAVFPTIYSS MRNNRHFSKV LLISSVLCSV NYGLTAVLGY MIYGEDVQSQ
301: VTLNLPSGKL YTKVAIVTTL INPLAKYALL VAPITAAVEE RFYLPAGSAP ARVSVSTVVV VSTAVVASTV PFFGYLMSFI GSFLSVMATV IFPCLCFLKI
401: YRAEGISRIE VAAIAGILMM GVFVAVTGTY TSLQQIIGSL CKLAMAAESH LDEPLLLRGG SFGDVSFWRS CLNLSNVISG VGLLSVPYAL AQGGWLSLVL
501: FAVVGAVCYY TGELIARCMR AGGDDIRSYP DIGYLAFGRL GRKAIGAVMY IELYLVAISF LILEGDNLDK LLPGTAVGLP GGYVLRGKQL FTLAAAVVIL
601: PTTWLRDLCV LAYVSAVGLV ASVALTASLV WAGVAEHGFH AAQDGNLFSL AGLPTSLSLY FVCFSGHGVF PTVYTSMRNK QDFTKVLLAS SVLCSLNYAL
701: TAVLGYMIYG DDVKSLVTLN LPSGKAYTRI AILTTLITPL AKYALVIQPI MTGIEEKLPP RARQGRLTRA AISTAVLVST VVAACTVPFF GYLMSFIGSS
801: LNVTVAVLFP CLSYLRVGRV RRRSEAAWIV AILVFGLCVA VKGTYASLHQ ILSTFW

Best Arabidopsis Sequence Match ( AT5G15240.1 )
(BLAST)

001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF

Arabidopsis Description

AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.