Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082135 | Potato | plasma membrane | 60.67 | 89.22 |
| Solyc06g061260.1.1 | Tomato | plasma membrane | 94.0 | 73.06 |
| PGSC0003DMT400076795 | Potato | plasma membrane | 52.67 | 23.51 |
| VIT_01s0026g02500.t01 | Wine grape | plasma membrane | 59.33 | 21.65 |
| TraesCS1B01G058900.1 | Wheat | plasma membrane | 58.67 | 20.56 |
| Zm00001d037229_P001 | Maize | plasma membrane | 54.67 | 20.55 |
| GSMUA_Achr10P... | Banana | plasma membrane | 60.0 | 20.45 |
| TraesCS7B01G093100.1 | Wheat | plasma membrane | 54.0 | 20.3 |
| TraesCS7D01G189100.1 | Wheat | plasma membrane | 54.0 | 20.3 |
| PGSC0003DMT400076791 | Potato | plasma membrane | 56.67 | 20.24 |
| TraesCS2B01G343300.2 | Wheat | plasma membrane | 59.33 | 20.23 |
| TraesCS7A01G188100.1 | Wheat | plasma membrane | 53.33 | 20.05 |
| TraesCS2D01G324400.2 | Wheat | plasma membrane | 58.67 | 20.0 |
| TraesCS2A01G338600.1 | Wheat | plasma membrane | 58.67 | 20.0 |
| HORVU7Hr1G038300.27 | Barley | plasma membrane | 53.33 | 20.0 |
| TraesCS4D01G284500.1 | Wheat | plasma membrane | 48.67 | 19.84 |
| KXG19641 | Sorghum | plasma membrane | 52.67 | 19.8 |
| HORVU2Hr1G080430.3 | Barley | cytosol | 58.0 | 19.77 |
| KRG89633 | Soybean | plasma membrane | 52.0 | 19.16 |
| Os06t0228500-01 | Rice | plasma membrane | 52.67 | 19.13 |
| HORVU2Hr1G080390.1 | Barley | plasma membrane | 53.33 | 18.82 |
| HORVU2Hr1G080420.1 | Barley | plasma membrane | 53.33 | 18.82 |
| PGSC0003DMT400008751 | Potato | plasma membrane | 53.33 | 18.78 |
| HORVU2Hr1G069080.4 | Barley | cytosol, peroxisome, plasma membrane | 50.0 | 18.43 |
| TraesCS2D01G324000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.33 | 18.12 |
| TraesCS2A01G339100.1 | Wheat | plasma membrane | 51.33 | 18.12 |
| TraesCS2B01G342900.1 | Wheat | plasma membrane | 50.67 | 17.88 |
| TraesCS2A01G282000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 48.0 | 17.69 |
| TraesCS2D01G280800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 48.0 | 17.69 |
| Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 50.0 | 17.69 |
| TraesCS2A01G338800.1 | Wheat | plasma membrane | 52.67 | 17.67 |
| TraesCS2D01G324300.1 | Wheat | plasma membrane | 52.67 | 17.67 |
| TraesCS2B01G343200.2 | Wheat | plasma membrane | 52.67 | 17.48 |
| HORVU2Hr1G080350.5 | Barley | mitochondrion, plasma membrane, vacuole | 51.33 | 17.46 |
| TraesCS2B01G299200.1 | Wheat | plasma membrane | 47.33 | 17.44 |
| EES10943 | Sorghum | cytosol, peroxisome, plasma membrane | 53.33 | 17.32 |
| Zm00001d003422_P001 | Maize | cytosol, plasma membrane, vacuole | 52.67 | 17.25 |
| Os01t0597400-00 | Rice | cytosol, peroxisome, plasma membrane | 50.67 | 17.16 |
| EES01014 | Sorghum | plasma membrane | 49.33 | 17.05 |
| TraesCS4A01G018400.1 | Wheat | peroxisome, plasma membrane, vacuole | 48.67 | 16.94 |
| TraesCS4A01G018500.1 | Wheat | peroxisome, plasma membrane, vacuole | 48.67 | 16.94 |
| TraesCS4B01G285800.1 | Wheat | peroxisome, plasma membrane, vacuole | 48.67 | 16.94 |
| TraesCS3B01G499000.1 | Wheat | plasma membrane | 46.0 | 16.87 |
| TraesCS4B01G285500.1 | Wheat | plasma membrane | 48.0 | 16.71 |
| OQU87120 | Sorghum | peroxisome, plasma membrane, vacuole | 49.33 | 16.7 |
| TraesCS4D01G284600.1 | Wheat | peroxisome, plasma membrane, vacuole | 48.0 | 16.67 |
| TraesCS4A01G018300.1 | Wheat | peroxisome, plasma membrane, vacuole | 43.33 | 16.01 |
| PGSC0003DMT400055694 | Potato | extracellular, plasma membrane | 35.33 | 14.36 |
| PGSC0003DMT400080507 | Potato | peroxisome | 44.67 | 12.81 |
| PGSC0003DMT400028760 | Potato | cytosol, peroxisome, plasma membrane | 40.67 | 11.53 |
| PGSC0003DMT400019190 | Potato | cytosol, nucleus, plasma membrane | 42.0 | 10.47 |
| PGSC0003DMT400086252 | Potato | plasma membrane | 25.33 | 8.94 |
| PGSC0003DMT400094217 | Potato | plasma membrane | 24.0 | 8.53 |
| PGSC0003DMT400048045 | Potato | plasma membrane | 24.0 | 8.43 |
| Zm00001d044387_P001 | Maize | nucleus | 47.33 | 8.29 |
| PGSC0003DMT400045065 | Potato | plasma membrane, plastid | 22.0 | 7.84 |
| PGSC0003DMT400033422 | Potato | plasma membrane | 21.33 | 7.41 |
| PGSC0003DMT400036273 | Potato | cytosol, nucleus, plasma membrane | 16.0 | 5.41 |
| Os04t0460200-01 | Rice | endoplasmic reticulum | 2.0 | 1.22 |
| Os05t0364700-00 | Rice | extracellular | 0.0 | 0.0 |
| Os04t0460300-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400019843 | EnsemblPlantsGene:PGSC0003DMG400007675 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF465 | PFAM:PF01490 | PGSC:PGSC0003DMG400007675 | TMHMM:TMhelix | UniParc:UPI000294A15E |
| UniProt:M1ACN7 | MapMan:35.1 | : | : | : | : |
Description
Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400007675]
Coordinates
chr6:-:44978943..44979587
Molecular Weight (calculated)
16710.2 Da
IEP (calculated)
9.916
GRAVY (calculated)
0.861
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYLMYGQNL MSQITLNLPT EKISSKIAIY TTIFNPITKY ALVVSPIATA IEDKLPLRKS KYIVSYFIRT FLVISTVIVA LTVPFFGYVM TFTGVLLGVT
101: VSILLPCLCY LKIKKPSYSE VVFIWMILVF GSSVAISGTY TSLKNIISHV
101: VSILLPCLCY LKIKKPSYSE VVFIWMILVF GSSVAISGTY TSLKNIISHV
001: MNADRNIKTY PDIGERAFGR PGRIIVSVFM HLELYLVTTG FLILEGDNLH NLFPGFTIEM IGLRLNGKQA FMATVAFVIM PTLWWDNLSV LSYVSMSGVL
101: ATTVTLGSIS WIGAFDGIGF HQKGKLINWS GIPTALSLYA FCYGAHPVLP TLYSSMKSKH QFNNVLLICF ILCTIGYTSM AVLGYLMYGS QTLSQITLNL
201: PIHKTSSKVA IYTTLVNPVA KYALMITPTV NTIKDWFPSR YSKKAYLHLL ISTFFIISSV VIAETLPFFG YMMSLVGALL SVTVSILLPC LCYLKIFGNY
301: KKIGCETIML FGMVVMSVFV GVIGTYIALR DIIGSV
101: ATTVTLGSIS WIGAFDGIGF HQKGKLINWS GIPTALSLYA FCYGAHPVLP TLYSSMKSKH QFNNVLLICF ILCTIGYTSM AVLGYLMYGS QTLSQITLNL
201: PIHKTSSKVA IYTTLVNPVA KYALMITPTV NTIKDWFPSR YSKKAYLHLL ISTFFIISSV VIAETLPFFG YMMSLVGALL SVTVSILLPC LCYLKIFGNY
301: KKIGCETIML FGMVVMSVFV GVIGTYIALR DIIGSV
Arabidopsis Description
AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.