Factsheet for HORVU2Hr1G069080.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G282000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	92.38	92.38
TraesCS2B01G299200.1	Wheat	plasma membrane	91.65	91.65
TraesCS2D01G280800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	91.4	91.4
HORVU7Hr1G038300.27	Barley	plasma membrane	64.37	65.5
GSMUA_Achr7P18140_001	Banana	plasma membrane	56.02	53.65
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	27.52	53.33
VIT_01s0026g02500.t01	Wine grape	plasma membrane	53.32	52.8
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	22.11	52.63
Solyc05g053970.2.1	Tomato	plasma membrane	45.45	52.56
HORVU2Hr1G080390.1	Barley	plasma membrane	52.33	50.12
HORVU2Hr1G080420.1	Barley	plasma membrane	52.33	50.12
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	18.43	50.0
Solyc06g061260.1.1	Tomato	plasma membrane	23.34	49.22
KRG89633	Soybean	plasma membrane	47.91	47.91
HORVU2Hr1G080430.3	Barley	cytosol	51.11	47.27
HORVU2Hr1G080350.5	Barley	mitochondrion, plasma membrane, vacuole	50.86	46.94
HORVU2Hr1G075350.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	17.94	42.44
PGSC0003DMT400082135	Potato	plasma membrane	10.32	41.18
HORVU4Hr1G022660.1	Barley	extracellular	21.13	38.91
HORVU4Hr1G012350.1	Barley	endoplasmic reticulum, plasma membrane	30.71	31.25
HORVU6Hr1G083720.2	Barley	plastid	42.75	29.9
HORVU2Hr1G008090.4	Barley	cytosol, peroxisome, plasma membrane	39.31	28.47
HORVU6Hr1G001480.1	Barley	plasma membrane	40.54	27.78
HORVU5Hr1G020560.3	Barley	plasma membrane	38.82	26.69
HORVU5Hr1G112210.1	Barley	plasma membrane	22.85	21.88
HORVU2Hr1G068460.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	8.35	21.66
HORVU6Hr1G064740.1	Barley	plasma membrane	22.36	21.62
HORVU5Hr1G053550.1	Barley	plasma membrane	21.87	21.14
HORVU2Hr1G068450.4	Barley	mitochondrion	18.18	17.49
HORVU5Hr1G112960.2	Barley	cytosol	14.74	17.14

Protein Annotations

EnsemblPlants:HORVU2Hr1G069080.4	EnsemblPlantsGene:HORVU2Hr1G069080	GO:GO:0005575	GO:GO:0016020	InterPro:AA_transpt_TM	PANTHER:PTHR22950
PANTHER:PTHR22950:SF280	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002961153	UniProt:M0WF50
MapMan:24.2.3.4.7	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:487040735..487042193

Molecular Weight (calculated)

43016.4 Da

IEP (calculated)

8.911

GRAVY (calculated)

0.788

Length

407 amino acids

Sequence
(BLAST)

001: MDTTTTNTDP APSSCKTSFL ETCFNGINAL SGVGLLSIPY ALSQGGWLSL IVFMTIAVIC FYTGILLQRC IDSSSHVNTY PDIGAHAFGR RGRVVVATFM
101: YLELYLVAID FLILEGDNLH KLFPAASYRL GALRVSGKDA FVLAATLLVL PTTWFSSLNV LAYVAAGGAL ASVLLIAAVL WVGVFDGVGF RETGRLVHWD
201: SMPSAMSLYS FCFSGHAVFP MIYTGMKDRK RFPMVLSICF TLSTLSYGLM GILGYLMYGD TLKSQITLNL PSASVAAKLA IYTTLVNPLA KYALVVAPVA
301: EAAEGTLGVG KSAPLRALVR TVLVVGTAVV ALAVPFFADV VGLTGALLSC TATMLLPCLC YLKVRSKIGS ARGMGLETAA CLAIVAIGSA VAGLGTYSSV
401: KQIVRKL

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.