Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G343300.2 | Wheat | plasma membrane | 88.18 | 88.18 |
| TraesCS2D01G324400.2 | Wheat | plasma membrane | 88.18 | 88.18 |
| TraesCS2A01G338600.1 | Wheat | plasma membrane | 87.95 | 87.95 |
| TraesCS1B01G058900.1 | Wheat | plasma membrane | 82.5 | 84.81 |
| EES10943 | Sorghum | cytosol, peroxisome, plasma membrane | 72.95 | 69.48 |
| Zm00001d003422_P001 | Maize | cytosol, plasma membrane, vacuole | 71.59 | 68.78 |
| HORVU2Hr1G080390.1 | Barley | plasma membrane | 58.18 | 60.24 |
| HORVU2Hr1G080420.1 | Barley | plasma membrane | 58.18 | 60.24 |
| Solyc05g050440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 23.18 | 59.65 |
| Solyc05g053970.2.1 | Tomato | plasma membrane | 47.05 | 58.81 |
| PGSC0003DMT400019843 | Potato | peroxisome, plasma membrane, plastid, vacuole | 19.77 | 58.0 |
| VIT_01s0026g02500.t01 | Wine grape | plasma membrane | 53.18 | 56.93 |
| HORVU2Hr1G080350.5 | Barley | mitochondrion, plasma membrane, vacuole | 56.59 | 56.46 |
| Solyc06g061260.1.1 | Tomato | plasma membrane | 23.64 | 53.89 |
| Solyc06g061270.1.1 | Tomato | cytosol, plasma membrane | 25.23 | 52.86 |
| PGSC0003DMT400082135 | Potato | plasma membrane | 12.05 | 51.96 |
| HORVU7Hr1G038300.27 | Barley | plasma membrane | 47.05 | 51.75 |
| HORVU2Hr1G069080.4 | Barley | cytosol, peroxisome, plasma membrane | 47.27 | 51.11 |
| KRG89633 | Soybean | plasma membrane | 45.91 | 49.63 |
| HORVU2Hr1G075350.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 17.27 | 44.19 |
| HORVU4Hr1G022660.1 | Barley | extracellular | 21.59 | 42.99 |
| HORVU4Hr1G012350.1 | Barley | endoplasmic reticulum, plasma membrane | 31.36 | 34.5 |
| HORVU2Hr1G008090.4 | Barley | cytosol, peroxisome, plasma membrane | 40.0 | 31.32 |
| HORVU6Hr1G083720.2 | Barley | plastid | 40.45 | 30.58 |
| HORVU6Hr1G001480.1 | Barley | plasma membrane | 39.32 | 29.12 |
| HORVU5Hr1G020560.3 | Barley | plasma membrane | 38.18 | 28.38 |
| HORVU6Hr1G064740.1 | Barley | plasma membrane | 24.09 | 25.18 |
| HORVU2Hr1G068460.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 8.18 | 22.93 |
| HORVU5Hr1G112210.1 | Barley | plasma membrane | 21.82 | 22.59 |
| HORVU5Hr1G053550.1 | Barley | plasma membrane | 20.23 | 21.14 |
| HORVU5Hr1G112960.2 | Barley | cytosol | 14.32 | 18.0 |
| HORVU2Hr1G068450.4 | Barley | mitochondrion | 16.59 | 17.26 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G080430.3 | EnsemblPlantsGene:HORVU2Hr1G080430 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF465 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B47E3C8 |
| UniProt:A0A287ILK9 | MapMan:24.2.3.4.7 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:582798779..582800976
Molecular Weight (calculated)
41727.5 Da
IEP (calculated)
7.951
GRAVY (calculated)
0.862
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIGGAAPHD SXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXCFN GLNALSGVGL LSIPYALAEG GWLSLVLLLL VAMVCCYTGQ
101: LLQTCMGASP DVRGYPDIGA LAFGAKGRFA VSAFMYAELY LVAIGFLILE GDNLDKLFPG TSLSLGGVLV LSGKHLFIVL VSIVILPTTW LRNLGVLAYV
201: SASGVLASVV LVFCVLWAAV VDGVGFQGKG TMLNVSGLPT ALGLYTFCYC GHAIFPTLCN SMKEKDKFSK VLVICFVACT LNYGSMAILG YLMYGDDVES
301: QVTLNLPEGK LSSKLAIYTA LINPFSKYAL MVTPVATAIE EKLLAGNKRS LNMLIRTFIV LSTVIVALTV PFFGHLMALV GSLLSVMASM LLPCICYLKI
401: FGTARCSRAE VALIVMIIIL GSLVAASGTY SSLQKIIHEF
101: LLQTCMGASP DVRGYPDIGA LAFGAKGRFA VSAFMYAELY LVAIGFLILE GDNLDKLFPG TSLSLGGVLV LSGKHLFIVL VSIVILPTTW LRNLGVLAYV
201: SASGVLASVV LVFCVLWAAV VDGVGFQGKG TMLNVSGLPT ALGLYTFCYC GHAIFPTLCN SMKEKDKFSK VLVICFVACT LNYGSMAILG YLMYGDDVES
301: QVTLNLPEGK LSSKLAIYTA LINPFSKYAL MVTPVATAIE EKLLAGNKRS LNMLIRTFIV LSTVIVALTV PFFGHLMALV GSLLSVMASM LLPCICYLKI
401: FGTARCSRAE VALIVMIIIL GSLVAASGTY SSLQKIIHEF
001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
Arabidopsis Description
AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.