Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G068460.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 35.46 | 95.54 |
| Os07t0231400-01 | Rice | plasma membrane | 68.79 | 80.61 |
| TraesCS2D01G278600.1 | Wheat | plasma membrane | 78.25 | 78.81 |
| TraesCS2A01G279700.1 | Wheat | plasma membrane | 77.78 | 78.33 |
| TraesCS2B01G297200.1 | Wheat | plasma membrane | 76.83 | 77.38 |
| EER98235 | Sorghum | plastid | 66.9 | 65.81 |
| Zm00001d019225_P001 | Maize | plasma membrane | 65.72 | 64.95 |
| HORVU5Hr1G053550.1 | Barley | plasma membrane | 61.47 | 61.76 |
| GSMUA_Achr1P27880_001 | Banana | nucleus, peroxisome, plasma membrane | 44.92 | 54.44 |
| HORVU5Hr1G112210.1 | Barley | plasma membrane | 47.75 | 47.53 |
| HORVU5Hr1G112960.2 | Barley | cytosol | 34.99 | 42.29 |
| KRG96325 | Soybean | plasma membrane | 42.08 | 42.18 |
| KRH68062 | Soybean | plasma membrane | 41.61 | 41.9 |
| CDY08487 | Canola | plasma membrane | 40.43 | 41.01 |
| CDY01068 | Canola | plasma membrane | 39.72 | 40.1 |
| Bra034803.1-P | Field mustard | plasma membrane | 40.19 | 39.81 |
| AT3G11900.2 | Thale cress | plasma membrane | 39.95 | 39.12 |
| Bra001425.1-P | Field mustard | plasma membrane | 39.24 | 38.97 |
| CDX73848 | Canola | plasma membrane | 39.24 | 38.97 |
| CDY53922 | Canola | plasma membrane | 39.01 | 38.73 |
| VIT_05s0062g01130.t01 | Wine grape | plasma membrane | 29.08 | 38.32 |
| HORVU6Hr1G064740.1 | Barley | plasma membrane | 28.37 | 28.5 |
| HORVU2Hr1G075350.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 9.46 | 23.26 |
| HORVU4Hr1G022660.1 | Barley | extracellular | 11.58 | 22.17 |
| HORVU7Hr1G038300.27 | Barley | plasma membrane | 19.15 | 20.25 |
| HORVU2Hr1G069080.4 | Barley | cytosol, peroxisome, plasma membrane | 17.49 | 18.18 |
| HORVU2Hr1G080350.5 | Barley | mitochondrion, plasma membrane, vacuole | 18.91 | 18.14 |
| HORVU2Hr1G080390.1 | Barley | plasma membrane | 17.49 | 17.41 |
| HORVU2Hr1G080420.1 | Barley | plasma membrane | 17.49 | 17.41 |
| HORVU2Hr1G080430.3 | Barley | cytosol | 17.26 | 16.59 |
| HORVU4Hr1G012350.1 | Barley | endoplasmic reticulum, plasma membrane | 14.66 | 15.5 |
| HORVU2Hr1G008090.4 | Barley | cytosol, peroxisome, plasma membrane | 20.09 | 15.12 |
| HORVU5Hr1G020560.3 | Barley | plasma membrane | 20.57 | 14.7 |
| HORVU6Hr1G083720.2 | Barley | plastid | 18.68 | 13.57 |
| HORVU6Hr1G001480.1 | Barley | plasma membrane | 18.44 | 13.13 |
| TraesCS2A01G279600.1 | Wheat | plasma membrane | 1.18 | 1.41 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G068450.4 | EnsemblPlantsGene:HORVU2Hr1G068450 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF462 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B46D87E |
| UniProt:A0A287IBA1 | MapMan:24.2.3.4.4 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:481491357..481493751
Molecular Weight (calculated)
46067.2 Da
IEP (calculated)
7.854
GRAVY (calculated)
0.517
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: CWGWLRRRAR LPRCWRGRTG EGVEAGEEQP GRRRWATWWC PLWARGCSAC PTPSEPPAGS PDPSALPPQD SPCSTACSSS SVPWTVEING GTDEPKNYTY
101: GDLGEKCFGT IGRCLTEILI LVSQAGGSVA YLVFIGENLH SVFSQLMSPA GFIFAVFLPV QIALSFILSL SSLSPFSIFA DVCNVLAVAI VIRKDLQLID
201: HPFANRSAFN GVLAIPYAFG VAVFCFEGFS MILALESSMA ERRKFRWVLS QAVVGIIVLY VCFGVCGYLA YGEATRDIIT LNLPNSWSSA AVKVGLCIAL
301: AFTFPVMMHP IHEIVEARFR SSGCFQKLSH GVPGAEWLGL HSSRIIMVTI LTVMASFIPA FGSFVSFVGC TVCALLSFVL PTFFHLNIVG SSMSIWRRVL
401: DYGFLLFGLG FAGYGIFTAL PSH
101: GDLGEKCFGT IGRCLTEILI LVSQAGGSVA YLVFIGENLH SVFSQLMSPA GFIFAVFLPV QIALSFILSL SSLSPFSIFA DVCNVLAVAI VIRKDLQLID
201: HPFANRSAFN GVLAIPYAFG VAVFCFEGFS MILALESSMA ERRKFRWVLS QAVVGIIVLY VCFGVCGYLA YGEATRDIIT LNLPNSWSSA AVKVGLCIAL
301: AFTFPVMMHP IHEIVEARFR SSGCFQKLSH GVPGAEWLGL HSSRIIMVTI LTVMASFIPA FGSFVSFVGC TVCALLSFVL PTFFHLNIVG SSMSIWRRVL
401: DYGFLLFGLG FAGYGIFTAL PSH
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.