Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G278600.1 | Wheat | plasma membrane | 98.1 | 98.1 |
| TraesCS2B01G297200.1 | Wheat | plasma membrane | 96.67 | 96.67 |
| HORVU2Hr1G068460.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 33.81 | 90.45 |
| Os07t0231400-01 | Rice | plasma membrane | 73.57 | 85.6 |
| EER98235 | Sorghum | plastid | 81.9 | 80.0 |
| Zm00001d019225_P001 | Maize | plasma membrane | 80.24 | 78.74 |
| TraesCS5A01G176900.1 | Wheat | plasma membrane | 78.1 | 77.91 |
| HORVU2Hr1G068450.4 | Barley | mitochondrion | 78.33 | 77.78 |
| TraesCS5A01G472500.1 | Wheat | plasma membrane | 60.0 | 59.86 |
| TraesCS5A01G472600.1 | Wheat | plasma membrane | 59.52 | 58.82 |
| GSMUA_Achr1P27880_001 | Banana | nucleus, peroxisome, plasma membrane | 46.43 | 55.87 |
| CDY08487 | Canola | plasma membrane | 51.9 | 52.28 |
| KRG96325 | Soybean | plasma membrane | 52.14 | 51.9 |
| KRH68062 | Soybean | plasma membrane | 51.67 | 51.67 |
| VIT_05s0062g01130.t01 | Wine grape | plasma membrane | 39.29 | 51.4 |
| CDY01068 | Canola | plasma membrane | 51.19 | 51.31 |
| Bra034803.1-P | Field mustard | plasma membrane | 51.67 | 50.82 |
| Bra001425.1-P | Field mustard | plasma membrane | 50.71 | 50.0 |
| CDX73848 | Canola | plasma membrane | 50.71 | 50.0 |
| CDY53922 | Canola | plasma membrane | 50.48 | 49.77 |
| AT3G11900.2 | Thale cress | plasma membrane | 50.95 | 49.54 |
| TraesCS2A01G403800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 35.95 | 35.7 |
| TraesCS6A01G254100.1 | Wheat | plasma membrane | 35.48 | 35.39 |
| TraesCS7A01G188100.1 | Wheat | plasma membrane | 23.1 | 24.31 |
| TraesCS2A01G339100.1 | Wheat | plasma membrane | 23.1 | 22.82 |
| TraesCS4A01G018500.1 | Wheat | peroxisome, plasma membrane, vacuole | 23.33 | 22.74 |
| TraesCS4A01G018400.1 | Wheat | peroxisome, plasma membrane, vacuole | 22.62 | 22.04 |
| TraesCS2A01G282000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 20.71 | 21.38 |
| TraesCS2A01G338600.1 | Wheat | plasma membrane | 22.38 | 21.36 |
| TraesCS4A01G018300.1 | Wheat | peroxisome, plasma membrane, vacuole | 20.24 | 20.94 |
| TraesCS2A01G338800.1 | Wheat | plasma membrane | 21.43 | 20.13 |
| TraesCS6A01G348300.2 | Wheat | cytosol, plasma membrane, vacuole | 22.62 | 19.92 |
| TraesCS2A01G052500.1 | Wheat | plasma membrane | 25.24 | 19.13 |
| TraesCS6A01G348400.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.81 | 18.9 |
| TraesCS4A01G240700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 19.29 | 17.92 |
| TraesCS5A01G081500.1 | Wheat | plasma membrane | 24.52 | 17.25 |
| TraesCS6A01G002400.1 | Wheat | cytosol, nucleus, plasma membrane | 21.67 | 16.08 |
| TraesCS2A01G279600.1 | Wheat | plasma membrane | 1.43 | 1.69 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G279700.1 | EnsemblPlantsGene:TraesCS2A01G279700 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF462 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.4 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:465554294..465556674
Molecular Weight (calculated)
44945.2 Da
IEP (calculated)
7.367
GRAVY (calculated)
0.730
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAKGAAAP LLAREDGRRR GGWGGATWAQ TLGNVVVSIV GTGVLGLPYA FRAAGWVAGS LGVAAAGFAT LYCMLLLVDC KDKLQEEETD EPKNYTYGDF
101: GEKCFGTIGR CLTEILILIS QAGGSVAYLV FIGENLHSVF SQSMSPAGFI FAVLLPVQIA LSFILSLSSL SPFSIFADVC NVLAAAVVIR KDLQLIDHPF
201: ANRSAFNGVL AIPFAFGVAV FCFEGFSMTL ALESSMAERR KFRWVLSQAV VGIIVVYACF GVCGYLAYGE ATKDIITLNL PNSWSSAAVK VGLCIALAFT
301: FPVMMHPIHE IVETRLRSSG CFQKLSHGVP GAEWLGLHSS RIIMVTILTV MASCIPAFGS FVSFVGCTVC ALLSFVLPTF FHLNIVGSSM SLWRRVLDYG
401: FLLFGLGFAG YGIFTALSSH
101: GEKCFGTIGR CLTEILILIS QAGGSVAYLV FIGENLHSVF SQSMSPAGFI FAVLLPVQIA LSFILSLSSL SPFSIFADVC NVLAAAVVIR KDLQLIDHPF
201: ANRSAFNGVL AIPFAFGVAV FCFEGFSMTL ALESSMAERR KFRWVLSQAV VGIIVVYACF GVCGYLAYGE ATKDIITLNL PNSWSSAAVK VGLCIALAFT
301: FPVMMHPIHE IVETRLRSSG CFQKLSHGVP GAEWLGLHSS RIIMVTILTV MASCIPAFGS FVSFVGCTVC ALLSFVLPTF FHLNIVGSSM SLWRRVLDYG
401: FLLFGLGFAG YGIFTALSSH
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.