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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G084900.1 Wheat plasma membrane 97.82 97.5
TraesCS5D01G091100.1 Wheat plasma membrane 96.65 96.81
HORVU5Hr1G020560.3 Barley plasma membrane 93.8 94.59
HORVU2Hr1G075350.2 Barley endoplasmic reticulum, plasma membrane, vacuole 27.14 94.19
HORVU4Hr1G022660.1 Barley extracellular 33.33 90.05
EES17245 Sorghum cytosol, peroxisome, plasma membrane 76.21 78.99
Os12t0574000-01 Rice plasma membrane 74.2 74.58
Zm00001d030751_P001 Maize plasma membrane 76.21 71.99
Zm00001d041534_P002 Maize plasma membrane 70.69 69.29
Zm00001d032325_P001 Maize mitochondrion, plasma membrane, vacuole 29.98 66.3
GSMUA_Achr6P34060_001 Banana plasma membrane 49.08 53.08
TraesCS2A01G052500.1 Wheat plasma membrane 42.21 45.49
TraesCS6A01G002400.1 Wheat cytosol, nucleus, plasma membrane 42.71 45.05
Solyc10g084830.1.1 Tomato cytosol, peroxisome, plasma membrane 39.87 44.99
AT3G09340.1 Thale cress plasma membrane 39.53 44.7
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 39.53 44.7
CDY07919 Canola cytosol, nucleus, plasma membrane 39.36 44.51
AT5G02170.1 Thale cress plasma membrane 39.2 44.49
AT3G09330.1 Thale cress cytosol, nucleus, plasma membrane 39.03 44.47
PGSC0003DMT400028760 Potato cytosol, peroxisome, plasma membrane 39.36 44.42
CDY40336 Canola plasma membrane 40.37 44.06
Bra009608.1-P Field mustard plasma membrane 40.2 43.88
AT5G02180.1 Thale cress plasma membrane 40.37 43.82
CDY55126 Canola plasma membrane 37.69 43.77
CDY10463 Canola plasma membrane 39.87 43.59
Bra005712.1-P Field mustard plasma membrane 36.52 43.43
TraesCS7A01G188100.1 Wheat plasma membrane 28.64 42.86
TraesCS2A01G339100.1 Wheat plasma membrane 30.15 42.35
CDX80808 Canola plasma membrane 17.92 42.29
TraesCS6A01G348300.2 Wheat cytosol, plasma membrane, vacuole 32.83 41.09
TraesCS2A01G282000.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 27.3 40.05
TraesCS2A01G338800.1 Wheat plasma membrane 29.98 40.04
TraesCS2A01G338600.1 Wheat plasma membrane 29.15 39.55
TraesCS6A01G348400.1 Wheat cytosol, peroxisome, plasma membrane 34.67 39.13
CDY55127 Canola cytosol, plasma membrane, plastid 38.02 38.87
TraesCS4A01G018500.1 Wheat peroxisome, plasma membrane, vacuole 27.47 38.05
TraesCS4A01G018400.1 Wheat peroxisome, plasma membrane, vacuole 27.3 37.82
CDX80809 Canola plasma membrane 37.35 37.61
TraesCS4A01G018300.1 Wheat peroxisome, plasma membrane, vacuole 24.29 35.71
TraesCS4A01G240700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 22.95 30.31
TraesCS5A01G472600.1 Wheat plasma membrane 18.09 25.41
TraesCS5A01G472500.1 Wheat plasma membrane 17.59 24.94
TraesCS5A01G176900.1 Wheat plasma membrane 17.42 24.7
TraesCS2A01G279700.1 Wheat plasma membrane 17.25 24.52
TraesCS2A01G403800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 17.25 24.35
TraesCS6A01G254100.1 Wheat plasma membrane 16.58 23.52
TraesCS2A01G279600.1 Wheat plasma membrane 0.34 0.56
Protein Annotations
EnsemblPlants:TraesCS5A01G081500.1EnsemblPlantsGene:TraesCS5A01G081500InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF249PFAM:PF01490
SEG:segTMHMM:TMhelixMapMan:24.2.3.4.7:::
Description
No Description!
Coordinates
chr5A:-:104977610..104980545
Molecular Weight (calculated)
63395.8 Da
IEP (calculated)
5.075
GRAVY (calculated)
0.357
Length
597 amino acids
Sequence
(BLAST)
001: MDRDEEKGHG DRSLLFIGDE DDDLGVDRDG GSPPSSDAGS SFSDRSDGGG DGDGADDGTG TGSGSGSDDD ADADGDKERA PNVARQQAAW PQSYRQSIDM
101: LSAVQSPSVT SIMAASPSIT KFGSSFLKAG SSFFLKKGAT EGSLPLTRPL LPPSLSQLSQ QQQQQPAGRP STDSLQPRPP APQPPAVQQR PSAACLKSNY
201: IELPLPSSKC SSGQSIINGL NVLCGVGILT TCFGIKQAGW LSLLLLPLLG ACSCYTGLLL KRCIDSSPTI ETYPDIGRAA FGIPGRVFVS VVLYLELYAC
301: CVEYITLLGD SLSSVFPSAH LAFTGIYLNS HNLFAISMAL AILPSVWLRN LSLLSYLSAG GVVATITVVV CLFWVGIGDG VGFHPSGSAL NLTHLPLALG
401: LYGYCFSGHS VFPNIYSSMK ERSQFPFVLL FCFIVVTIVY SGVAATGFLM FGESTMSQFT LNMPQQYVPS KIAIWMTIVN PYTKYALTMT PVALSIEEAL
501: PKMMRNYVAG MCVRTALVLS TVVVALSFPY FALVMALLGS VFTMLVALIL PCACYLSIKR ELVPLWEVVL CITIILIGLG CAFVGSYTSI NQMIGGS
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.