Factsheet for Solyc10g084830.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028760	Potato	cytosol, peroxisome, plasma membrane	94.71	94.71
HORVU2Hr1G075350.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	18.71	57.56
Solyc03g063030.2.1	Tomato	plasma membrane	25.52	57.45
HORVU4Hr1G022660.1	Barley	extracellular	22.31	53.39
AT5G02170.1	Thale cress	plasma membrane	50.47	50.76
CDY55126	Canola	plasma membrane	48.58	50.0
AT5G02180.1	Thale cress	plasma membrane	51.8	49.82
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	16.07	49.71
Bra005712.1-P	Field mustard	plasma membrane	47.07	49.6
Solyc03g063040.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	11.34	48.78
Bra009608.1-P	Field mustard	plasma membrane	50.28	48.63
AT3G09340.1	Thale cress	plasma membrane	48.39	48.48
AT3G09330.1	Thale cress	cytosol, nucleus, plasma membrane	48.02	48.47
CDY40336	Canola	plasma membrane	49.91	48.26
CDY10463	Canola	plasma membrane	49.53	47.99
Bra001315.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.26	47.35
CDY07919	Canola	cytosol, nucleus, plasma membrane	46.69	46.78
Solyc11g008440.1.1	Tomato	cytosol, nucleus, plasma membrane	48.77	46.49
GSMUA_Achr6P34060_001	Banana	plasma membrane	48.2	46.2
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	17.58	44.29
CDY55127	Canola	cytosol, plasma membrane, plastid	48.77	44.18
CDX80809	Canola	plasma membrane	49.34	44.01
CDX80808	Canola	plasma membrane	20.98	43.87
Solyc05g053970.2.1	Tomato	plasma membrane	29.11	43.75
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	45.75	42.01
Os12t0574000-01	Rice	plasma membrane	45.75	40.74
HORVU5Hr1G020560.3	Barley	plasma membrane	45.37	40.54
TraesCS5D01G091100.1	Wheat	plasma membrane	45.56	40.44
TraesCS5B01G084900.1	Wheat	plasma membrane	45.75	40.4
TraesCS5A01G081500.1	Wheat	plasma membrane	44.99	39.87
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	20.04	39.26
Solyc03g078150.2.1	Tomato	peroxisome	38.75	39.05
Zm00001d041534_P002	Maize	plasma membrane	44.8	38.92
Zm00001d030751_P001	Maize	plasma membrane	44.61	37.34
Solyc06g061260.1.1	Tomato	plasma membrane	13.61	37.31
Solyc03g063050.1.1	Tomato	extracellular, plasma membrane	18.71	37.22
Solyc03g013160.2.1	Tomato	plasma membrane	29.87	37.09
Solyc03g013440.2.1	Tomato	plasma membrane	23.44	35.84
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	11.72	34.44
Solyc09g098380.1.1	Tomato	plasma membrane	26.65	31.9
Solyc03g032090.1.1	Tomato	plasma membrane	19.66	24.36
Solyc02g082510.1.1	Tomato	plasma membrane	19.09	23.76
Solyc02g082520.1.1	Tomato	cytosol, peroxisome, plasma membrane	17.2	21.72
Solyc10g048180.1.1	Tomato	plasma membrane	17.2	21.31

Protein Annotations

EnsemblPlants:Solyc10g084830.1.1	EnsemblPlantsGene:Solyc10g084830.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF313	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI000276A593
UniProt:K4D3R7	MapMan:24.2.3.4.7	:	:	:	:

Description

No Description!

Coordinates

chr10:-:64225452..64229482

Molecular Weight (calculated)

57496.1 Da

IEP (calculated)

4.832

GRAVY (calculated)

0.543

Length

529 amino acids

Sequence
(BLAST)

001: MGMKLDEEYG ADRLLQIETD NEENEALDTL NEDDDTGSDI SNHSVHAPFH SQLDSPTWPQ SYRRSMDVFT GVTPPSLSFL KGSSILSSAY MRSQTLTPEH
101: SLSKPFISSP SLDREEIPTS NPSKLSIVSS ARYSAPELPP SQQCSYAQSV LNAINALCGI GILSVPYALK EGGWCSLFLL FLFGIITFYT GTLLKKCLES
201: SPGIETYPDI GQAAFGLSGR IFIAIALYAE LYSSCIEYLI MMSDNLGALF PNSHMEFAGI HLNSYQICAI ISTLIILPTV WLRNLRLLSI VSAGGVIALI
301: VVVICLLWVG VVDDVGFHPS GTAINIARLP VTIGLYSFCY GSHSVFPNIY SSMKEPSKFP SVLLISFSVA FFSYLGAAVC GFLMFGENTN PQFTLNLPTE
401: LVTSKVAAWT VVIAPLTKYA ITLTPVAFGI EEFLPSPQLR TYVVSLLIRT LLVFSTLVIA LAVPYFGSVM SLIGSSLVML VSLILPCVCY IQLSKDQITR
501: FQLAACSFII VVGLISAVFG TYSALTNMV

Best Arabidopsis Sequence Match ( AT5G02180.1 )
(BLAST)

001: MKLDEEFLHD RDHSFLTDDE ENQAALACSD DEHDGDDDGR RGGENSDSSS PLSRDRSDNN LSDVSNPPWP QSYRQSMDLL TGMTPPSVSF MPQSSSRRLA
101: SSFQKKQQSS FCDSLSSSSS KPLLSQPVPD KEETILPVNP QSQLKLSVTD LPLPEPNLCS FSQSVLNGTN VLCGLGLITM PYAIKESGWL GLPILLFFGV
201: ITCYTGVLMK RCLESSPGIQ TYPDIGQAAF GITGRFIISI LLYVELYAAC VEYIIMMSDN LSGLFPNVSL SIASGISLDS PQIFAILTTL LVLPTVWLKD
301: LSLLSYLSVG GVLASILLGI CLFWVGAVDG IGFHATGRVF DLSNLPVTIG IFGFGYSGHS VFPNIYSSMK DPSRFPLVLV ICFSFCTVLY IAVAVCGYTM
401: FGEAVESQFT LNMPKHFFPS KVAVWTAVIT PMTKYALTIT PIVMSLEELI PTAKMRSRGV SILFRTMLVT STLVVALSVP FFAIVAALIG SFLAMLVALI
501: FPCLCYLSIL KGKLSNTQIG LCIFIIVFGV VSGCCGTYSA ISRLANQMTD

Arabidopsis Description

AVT1DAmino acid transporter AVT1D [Source:UniProtKB/Swiss-Prot;Acc:Q8GYS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.