Factsheet for Bra001315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07919	Canola	cytosol, nucleus, plasma membrane	97.54	97.54
AT3G09330.1	Thale cress	cytosol, nucleus, plasma membrane	81.63	82.25
AT3G09340.1	Thale cress	plasma membrane	79.17	79.17
Bra005712.1-P	Field mustard	plasma membrane	66.1	69.52
Bra009608.1-P	Field mustard	plasma membrane	65.91	63.62
HORVU2Hr1G075350.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	18.94	58.14
HORVU4Hr1G022660.1	Barley	extracellular	23.3	55.66
Bra007103.1-P	Field mustard	plasma membrane	41.29	55.33
GSMUA_Achr6P34060_001	Banana	plasma membrane	50.0	47.83
Solyc10g084830.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.35	47.26
PGSC0003DMT400028760	Potato	cytosol, peroxisome, plasma membrane	47.16	47.07
Bra005061.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.53	46.42
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	46.97	45.42
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	21.02	41.11
Bra000217.1-P	Field mustard	plasma membrane	40.15	40.77
HORVU5Hr1G020560.3	Barley	plasma membrane	45.64	40.71
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	44.32	40.62
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.53	40.45
TraesCS5D01G091100.1	Wheat	plasma membrane	45.08	39.93
TraesCS5B01G084900.1	Wheat	plasma membrane	45.27	39.9
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.15	39.7
TraesCS5A01G081500.1	Wheat	plasma membrane	44.7	39.53
Os12t0574000-01	Rice	plasma membrane	43.94	39.06
Zm00001d030751_P001	Maize	plasma membrane	44.7	37.34
Zm00001d041534_P002	Maize	plasma membrane	42.99	37.27
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	12.5	36.67
Bra033075.1-P	Field mustard	plasma membrane	27.27	35.56
Bra025369.1-P	Field mustard	plasma membrane	27.08	35.31
Bra023581.1-P	Field mustard	plasma membrane	19.7	33.02
Bra029326.1-P	Field mustard	peroxisome	20.08	24.77
Bra000591.1-P	Field mustard	plasma membrane	18.56	24.26
Bra001425.1-P	Field mustard	plasma membrane	18.75	23.24
Bra033558.1-P	Field mustard	plasma membrane	15.53	22.91
Bra034803.1-P	Field mustard	plasma membrane	17.23	21.31

Protein Annotations

EnsemblPlants:Bra001315.1	EnsemblPlants:Bra001315.1-P	EnsemblPlantsGene:Bra001315	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF313	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025405AD	UniProt:M4CAT6	MapMan:24.2.3.4.7	:	:	:

Description

AT3G09330 (E=8e-232) | amino acid transporter family protein

Coordinates

chrA03:+:15811578..15815447

Molecular Weight (calculated)

57555.6 Da

IEP (calculated)

5.675

GRAVY (calculated)

0.569

Length

528 amino acids

Sequence
(BLAST)

001: MKLEEQESDI LFHADDEESQ VDVSCYDEDE ISRKSSQLSM NDSAPWPRSY RQSVDILTGV TPPTTSFIHR RGSQASSFTS SIASLYRRRP NSILNSFASS
101: TSKQPLLADK DDVSVKSYVS SQLKLSITDL SYEEQNLCSF PQSVLNGINI LCGVSLLTMP YAVKEGGWLG LIILFFFGII TCYTGILLKR CLESSPDIHT
201: YPDIGQAAFG FTGRLIISIL LYMELYACCV EYIIMMSDNL SRFFPHVSLN VAGVSIDSSQ IFAIATALIV LPTVWLRDLS LLSYLSAGGV FSSILLALCL
301: FWVGSVDGVG FHSGGQALDL SNLPVAIGIF GFGFSGHAVF PNIYSSMKDP SKFPLVLIIS FGFCVVFYIA VAVCGYSMFG EAIQSQFTLS MPQQFTSSKI
401: AVWTAVITPM TKYALTLTPI VLSLEELMPS SEKMRSNGVS MFLRTILVLS TLVVALAFPF FAIMGALMGS FLSMLLAFIL PCLCYLSILR GRLSKIQMGV
501: CVLIIIAGIV SGCCGTYSAI GKLVGERS

Best Arabidopsis Sequence Match ( AT3G09330.1 )
(BLAST)

001: MELEEQERDI LFPTDDEECQ VDVSCDDEDD DSSSYSSLSQ NDSAPWPRSY RQSVDILTGV TPPTISFIHR RSSQTSFTSS VASLYKRRPT SIANSFASST
101: SKQPLLSEKD DVLFLSSQIG LSNTDLSYGE PNFCSFPQSV LNGINVLCGI SLLTMPYAVK EGGWLGLCIL LSFAIITCYT GILLKRCLES SSDLRTYPDI
201: GQAAFGFTGR LIISILLYME LYVCCVEYII MMSDNLSRVF PNITLNIVGV SLDSPQIFAI SATLIVLPTV WLKDLSLLSY LSAGGVFVSI LLALCLFWVG
301: SVDGVGFHTG GKSLDLANLP VAIGIFGFGF SGHAVLPSIY SSMKEPSKFP LVLLISFGFC VFFYIVVAIC GYSMFGEAIQ SQFTLNMPQQ YTASKIAVWT
401: AVVVPMTKYA LALTPIVLGL EELMLPSEKM RSYGVSIFIK TILVLSTLVV ALTFPFFAIM GALMGSFLAM LVDFIFPCLC YLSILKGRLS KTQIGICVFI
501: IISGIVSGCC GTYSAIGRLV GKLD

Arabidopsis Description

AVT1GAmino acid transporter AVT1G [Source:UniProtKB/Swiss-Prot;Acc:Q1PER9]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.