Factsheet for Bra009608.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40336	Canola	plasma membrane	99.63	99.63
AT5G02180.1	Thale cress	plasma membrane	87.39	86.91
Bra005712.1-P	Field mustard	plasma membrane	60.69	66.14
Bra001315.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.62	65.91
Bra007103.1-P	Field mustard	plasma membrane	40.59	56.35
HORVU2Hr1G075350.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	17.0	54.07
HORVU4Hr1G022660.1	Barley	extracellular	20.66	51.13
Solyc10g084830.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.63	50.28
PGSC0003DMT400028760	Potato	cytosol, peroxisome, plasma membrane	48.45	50.09
GSMUA_Achr6P34060_001	Banana	plasma membrane	48.45	48.01
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	45.52	45.6
Bra005061.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.84	44.9
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	45.34	43.06
Bra000217.1-P	Field mustard	plasma membrane	40.77	42.88
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.32	42.72
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.22	41.2
HORVU5Hr1G020560.3	Barley	plasma membrane	44.24	40.88
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	20.11	40.74
TraesCS5D01G091100.1	Wheat	plasma membrane	44.24	40.6
TraesCS5B01G084900.1	Wheat	plasma membrane	44.06	40.23
TraesCS5A01G081500.1	Wheat	plasma membrane	43.88	40.2
Os12t0574000-01	Rice	plasma membrane	43.33	39.9
Zm00001d041534_P002	Maize	plasma membrane	43.33	38.92
Zm00001d030751_P001	Maize	plasma membrane	44.24	38.29
Bra033075.1-P	Field mustard	plasma membrane	27.24	36.79
Bra025369.1-P	Field mustard	plasma membrane	27.06	36.54
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	11.7	35.56
Bra023581.1-P	Field mustard	plasma membrane	16.82	29.21
Bra000591.1-P	Field mustard	plasma membrane	18.28	24.75
Bra001425.1-P	Field mustard	plasma membrane	17.73	22.77
Bra033558.1-P	Field mustard	plasma membrane	14.81	22.63
Bra029326.1-P	Field mustard	peroxisome	17.55	22.43
Bra034803.1-P	Field mustard	plasma membrane	16.64	21.31

Protein Annotations

EnsemblPlants:Bra009608.1	EnsemblPlants:Bra009608.1-P	EnsemblPlantsGene:Bra009608	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF313	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002547E05
UniProt:M4CZG1	MapMan:24.2.3.4.7	:	:	:	:

Description

AT5G02180 (E=3e-251) | amino acid transporter family protein

Coordinates

chrA10:-:17424169..17426828

Molecular Weight (calculated)

59291.7 Da

IEP (calculated)

6.033

GRAVY (calculated)

0.469

Length

547 amino acids

Sequence
(BLAST)

001: MKLDEEFLHD RDHSFLTDDE ENQADLACSD DEHDGDGRRC GANSDTSSPL SRNRSDNNLT DVPNPPWPQS YRRSMDLMTG MTPPSVSFMP RSLSRRSGSS
101: FHKKQQSSFF DSFSSSASKP LLSQPDPDKE DTILPSHFPS QLKLSVTDLP LPQSNLCSVS QSILNGTNVL CGLGLITMPY AIKESGWLGL LILSFFGVIT
201: CYTGILLKRC LESSPGLQTY PDIGQAAFGI TGRCIISILL YIELYAACVE YIIMMSDNLS GLFPNVSLGI TPGLSLDSAQ TFAVLTTILV LPTVWLKDLS
301: LLSYLSVGGV LASVLLGLCL LWVGAVDGIG FHATGKLMDF GNLPVAIGIF GFGYSGHSVF PNIYSSMKDP SKFPLVLVIC FGFCTVLYIA IAVCGYTMFG
401: EALQSQFTLN MPKHFLPSKI AVWTAVVTPM TKYALTITPI VLSLEELIPM AKMRSHGVSI LFRTILVIST LVVALSVPFF AIVAALIGSF LAMLVALIFP
501: CLCYLSILKG KLTNTQIGLC MFIIVFGLVS GCCGTYSAIS RLADQMT

Best Arabidopsis Sequence Match ( AT5G02180.1 )
(BLAST)

001: MKLDEEFLHD RDHSFLTDDE ENQAALACSD DEHDGDDDGR RGGENSDSSS PLSRDRSDNN LSDVSNPPWP QSYRQSMDLL TGMTPPSVSF MPQSSSRRLA
101: SSFQKKQQSS FCDSLSSSSS KPLLSQPVPD KEETILPVNP QSQLKLSVTD LPLPEPNLCS FSQSVLNGTN VLCGLGLITM PYAIKESGWL GLPILLFFGV
201: ITCYTGVLMK RCLESSPGIQ TYPDIGQAAF GITGRFIISI LLYVELYAAC VEYIIMMSDN LSGLFPNVSL SIASGISLDS PQIFAILTTL LVLPTVWLKD
301: LSLLSYLSVG GVLASILLGI CLFWVGAVDG IGFHATGRVF DLSNLPVTIG IFGFGYSGHS VFPNIYSSMK DPSRFPLVLV ICFSFCTVLY IAVAVCGYTM
401: FGEAVESQFT LNMPKHFFPS KVAVWTAVIT PMTKYALTIT PIVMSLEELI PTAKMRSRGV SILFRTMLVT STLVVALSVP FFAIVAALIG SFLAMLVALI
501: FPCLCYLSIL KGKLSNTQIG LCIFIIVFGV VSGCCGTYSA ISRLANQMTD

Arabidopsis Description

AVT1DAmino acid transporter AVT1D [Source:UniProtKB/Swiss-Prot;Acc:Q8GYS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.