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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • golgi 1
  • plasma membrane 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:golgi, plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79951 Canola cytosol, nucleus, plasma membrane 100.0 100.0
Bra000217.1-P Field mustard plasma membrane 86.77 88.27
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 86.77 85.96
AT2G41190.1 Thale cress cytosol, peroxisome, plasma membrane 84.69 83.58
PGSC0003DMT400080507 Potato peroxisome 59.17 59.85
TraesCS6A01G348300.2 Wheat cytosol, plasma membrane, vacuole 53.88 59.75
Solyc03g078150.2.1 Tomato peroxisome 59.17 59.62
VIT_08s0007g05210.t01 Wine grape plasma membrane 57.47 58.8
TraesCS6A01G348400.1 Wheat cytosol, peroxisome, plasma membrane 57.47 57.47
TraesCS6D01G331300.1 Wheat plasma membrane 55.77 57.28
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 58.41 57.22
KRH16006 Soybean cytosol 36.48 56.6
TraesCS6D01G331400.2 Wheat cytosol, peroxisome, plasma membrane 57.28 56.42
TraesCS6B01G382000.2 Wheat cytosol, peroxisome, plasma membrane 57.28 56.32
Zm00001d052063_P003 Maize plasma membrane 56.71 55.56
Zm00001d018336_P002 Maize plasma membrane 57.28 55.39
EES07657 Sorghum plasma membrane 54.25 54.98
EES07655 Sorghum plasma membrane 57.09 54.81
TraesCS6B01G381900.1 Wheat plasma membrane 52.55 54.4
KRG95106 Soybean cytosol, peroxisome, plasma membrane 46.31 53.26
KRH77523 Soybean cytosol, nucleus, plasma membrane 47.45 53.07
Zm00001d018340_P001 Maize cytosol, peroxisome, plasma membrane 52.74 52.84
HORVU6Hr1G083720.2 Barley plastid 57.28 52.06
Bra007103.1-P Field mustard plasma membrane 36.11 48.48
KRH66774 Soybean plasma membrane 24.39 48.31
Os02t0788800-01 Rice cytosol, peroxisome, plasma membrane 29.3 47.99
Bra009608.1-P Field mustard plasma membrane 42.72 41.32
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 40.45 40.53
Bra017088.1-P Field mustard cytosol, nucleus, plasma membrane 41.78 40.48
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 34.59 39.7
Bra033075.1-P Field mustard plasma membrane 30.06 39.26
Bra005712.1-P Field mustard plasma membrane 36.86 38.84
Bra025369.1-P Field mustard plasma membrane 29.49 38.52
Bra000591.1-P Field mustard plasma membrane 20.04 26.24
Bra023581.1-P Field mustard plasma membrane 15.31 25.71
Bra001425.1-P Field mustard plasma membrane 18.53 23.0
Bra029326.1-P Field mustard peroxisome 18.53 22.9
Bra034803.1-P Field mustard plasma membrane 18.34 22.72
Bra033558.1-P Field mustard plasma membrane 14.93 22.07
Protein Annotations
EnsemblPlants:Bra004605.1EnsemblPlants:Bra004605.1-PEnsemblPlantsGene:Bra004605GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF358PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002547683UniProt:M4CK71MapMan:24.2.3.4.7:::
Description
AT2G41190 (E=9e-257) | amino acid transporter family protein
Coordinates
chrA05:-:1005708..1008344
Molecular Weight (calculated)
57980.2 Da
IEP (calculated)
4.661
GRAVY (calculated)
0.354
Length
529 amino acids
Sequence
(BLAST)
001: MEKKPEFTFD DDEDSSKYEN DSETDRSDVA DLPGDDDNNN NDEDTFVSQV QWPQSFRETT DSYTIAASPI FGSLRSNPSF YNTSQKPSFY RQSRSNLDVE
101: SKAPFLPERN EESDKASAAQ SVWSRRGSFA EELAIGGYGC SLTQTIFNAI NVMAGVGLLS TPYTLKESGW AGMVILVLFA VICCYTATLM KECFENKTGI
201: ITYPDIGEAA FGISGRILIC VLLYTELYSY CVEFIILEGD NLTGLFPGTS LDWLGIHIDS QHLFGILTAL IVLPTVWLKD LRIISYLSAG GVLASVLIAL
301: STFFLGATSG IGFHHTGHAV KWNGVPFAIG IYGFCYSGHS VFPNIYQSMA DKTKFTKAVI ITFALCVLLY GGVGIMGYLM FGEATLSQIT LNMPKDLFFS
401: KVAQWTTVAS PFTKFALLMN PLARGIEELL PEGMPENIWC FLLLRTALVA SSVCAAFLIP FFGLVMALIG SILSILVAII MPALCFMRIM GNKATRTQII
501: LSWIIVAIGL VSGTLGTYSS VAKIIKNYE
Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)
001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ
Arabidopsis Description
AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.