Factsheet for TraesCS6B01G381900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	75.15	80.5
TraesCS6D01G331300.1	Wheat	plasma membrane	76.71	76.12
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	80.04	76.02
HORVU6Hr1G083720.2	Barley	plastid	80.04	70.27
Zm00001d018336_P002	Maize	plasma membrane	71.62	66.91
EES07655	Sorghum	plasma membrane	71.82	66.61
Zm00001d052063_P003	Maize	plasma membrane	70.25	66.48
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	61.06	57.78
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	35.81	56.66
Bra000217.1-P	Field mustard	plasma membrane	54.6	53.65
CDY35425	Canola	plasma membrane	54.6	53.65
CDY22507	Canola	plasma membrane	54.21	53.27
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	55.58	52.99
CDY06942	Canola	cytosol, peroxisome, plasma membrane	54.99	52.62
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.4	52.55
CDX79951	Canola	cytosol, nucleus, plasma membrane	54.4	52.55
CDY23868	Canola	cytosol, nucleus, plasma membrane	54.4	52.55
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.79	52.43
CDY67831	Canola	cytosol, peroxisome, plasma membrane	54.6	52.35
PGSC0003DMT400080507	Potato	peroxisome	53.42	52.2
Solyc03g078150.2.1	Tomato	peroxisome	52.84	51.43
VIT_08s0007g05210.t01	Wine grape	plasma membrane	50.68	50.1
KRH16006	Soybean	cytosol	32.88	49.27
KRH33027	Soybean	plasma membrane	54.01	47.34
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	42.47	47.17
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	40.9	46.86
KRH66774	Soybean	plasma membrane	23.48	44.94
KRH77523	Soybean	cytosol, nucleus, plasma membrane	39.53	42.71
TraesCS7B01G093100.1	Wheat	plasma membrane	33.27	42.61
TraesCS1B01G058900.1	Wheat	plasma membrane	35.42	42.29
TraesCS2B01G343300.2	Wheat	plasma membrane	36.2	42.05
TraesCS2B01G299200.1	Wheat	plasma membrane	33.07	41.52
TraesCS2B01G342900.1	Wheat	plasma membrane	34.44	41.41
TraesCS6B01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	42.86	38.9
TraesCS3B01G499000.1	Wheat	plasma membrane	30.72	38.39
TraesCS2B01G343200.2	Wheat	plasma membrane	33.66	38.05
TraesCS2B01G065200.1	Wheat	cytosol, peroxisome, plasma membrane	40.9	37.52
TraesCS4B01G285800.1	Wheat	peroxisome, plasma membrane, vacuole	30.53	36.19
TraesCS4B01G285500.1	Wheat	plasma membrane	30.33	35.96
TraesCS5B01G084900.1	Wheat	plasma membrane	39.33	33.56
TraesCS4B01G074300.1	Wheat	plasma membrane	26.42	28.54
TraesCS6B01G271500.1	Wheat	plasma membrane	21.53	26.13
TraesCS2B01G421800.1	Wheat	plasma membrane	20.74	25.06
TraesCS5B01G485500.1	Wheat	plasma membrane	20.35	24.47
TraesCS5B01G485400.1	Wheat	plasma membrane	20.16	24.47
TraesCS5B01G173000.1	Wheat	plasma membrane	17.81	21.62
TraesCS2B01G297200.1	Wheat	plasma membrane	17.61	21.43

Protein Annotations

EnsemblPlants:TraesCS6B01G381900.1	EnsemblPlantsGene:TraesCS6B01G381900	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF358	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr6B:-:656542938..656566115

Molecular Weight (calculated)

55554.2 Da

IEP (calculated)

7.924

GRAVY (calculated)

0.589

Length

511 amino acids

Sequence
(BLAST)

001: MEATFLLLEI HFFLRRPVRS AVPLHVKQHP EERVMKEKSP SQVVLVAVDP GSSAPVSEAS DAYTIAASPI FGYLGSSTRK SSIDGDLKLP FISDKLESIK
101: SLRRHLPGSV RDEDLSFQHN GGCSVTQTVF NGINALAGVG LLSTPFTIHE AGWSGLALLS FVAIICCYTG VLLKHCFESK DGITNYPDIG EAAFGRIGRL
201: FISIILYTEL YSYCVEFIIL EGDSMTSIFP GVNLNFLGIY VDSKHFFGVF TTLVILPTVW LRDLRVLSYL SAGGIVATLV VFVSVALVGT TEGVGFHPTG
301: EAVRWSGMPF AIGIYGFCYS GHSVFPNIYQ SMSDRTKFTK ALFICFAICT VIYGSFAIMG YLMFGDKTLS QITLNLPKES FASKVAMWTT VINPFTKFAL
401: FLNPLARSLE DLRPEGFLNE TICSVILRTA LVASTAVIAF LFPFFGLMMA LIGSLLSTLV AVIMPALCFL KIAQNKATRP QVIASVSIIV VGVVSAALGT
501: YSSVARIIGH Y

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.