Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- golgi 1
- plasma membrane 3
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G472600.1 | Wheat | plasma membrane | 96.0 | 96.0 |
| TraesCS5D01G485300.1 | Wheat | plasma membrane | 94.59 | 95.26 |
| HORVU5Hr1G112210.1 | Barley | plasma membrane | 92.94 | 92.94 |
| TraesCS5B01G485400.1 | Wheat | plasma membrane | 88.24 | 89.07 |
| Os03t0817200-01 | Rice | plasma membrane | 75.76 | 77.03 |
| EER93207 | Sorghum | plasma membrane | 73.41 | 73.24 |
| TraesCS5B01G173000.1 | Wheat | plasma membrane | 59.06 | 59.62 |
| TraesCS2B01G297200.1 | Wheat | plasma membrane | 58.35 | 59.05 |
| KRH68062 | Soybean | plasma membrane | 51.29 | 51.9 |
| KRG96325 | Soybean | plasma membrane | 50.82 | 51.18 |
| CDY08487 | Canola | plasma membrane | 49.41 | 50.36 |
| Bra001425.1-P | Field mustard | plasma membrane | 50.35 | 50.23 |
| CDX73848 | Canola | plasma membrane | 50.35 | 50.23 |
| VIT_05s0062g01130.t01 | Wine grape | plasma membrane | 37.88 | 50.16 |
| CDY01068 | Canola | plasma membrane | 49.41 | 50.12 |
| CDY53922 | Canola | plasma membrane | 50.12 | 50.0 |
| AT3G11900.2 | Thale cress | plasma membrane | 50.12 | 49.31 |
| Bra034803.1-P | Field mustard | plasma membrane | 49.41 | 49.18 |
| GSMUA_Achr1P27880_001 | Banana | nucleus, peroxisome, plasma membrane | 36.94 | 44.99 |
| TraesCS6B01G271500.1 | Wheat | plasma membrane | 33.88 | 34.2 |
| TraesCS2B01G421800.1 | Wheat | plasma membrane | 32.71 | 32.86 |
| TraesCS2B01G342900.1 | Wheat | plasma membrane | 25.88 | 25.88 |
| TraesCS4B01G285800.1 | Wheat | peroxisome, plasma membrane, vacuole | 25.41 | 25.06 |
| TraesCS4B01G285500.1 | Wheat | plasma membrane | 24.94 | 24.59 |
| TraesCS1B01G058900.1 | Wheat | plasma membrane | 24.71 | 24.53 |
| TraesCS3B01G499000.1 | Wheat | plasma membrane | 23.53 | 24.45 |
| TraesCS2B01G343300.2 | Wheat | plasma membrane | 24.71 | 23.86 |
| TraesCS2B01G299200.1 | Wheat | plasma membrane | 22.59 | 23.59 |
| TraesCS2B01G343200.2 | Wheat | plasma membrane | 24.94 | 23.45 |
| TraesCS7B01G093100.1 | Wheat | plasma membrane | 21.65 | 23.06 |
| TraesCS6B01G381900.1 | Wheat | plasma membrane | 24.47 | 20.35 |
| TraesCS6B01G382000.2 | Wheat | cytosol, peroxisome, plasma membrane | 24.24 | 19.14 |
| TraesCS2B01G065200.1 | Wheat | cytosol, peroxisome, plasma membrane | 24.24 | 18.49 |
| TraesCS5B01G084900.1 | Wheat | plasma membrane | 25.65 | 18.2 |
| TraesCS6B01G007400.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.76 | 17.94 |
| TraesCS4B01G074300.1 | Wheat | plasma membrane | 19.76 | 17.76 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G485500.1 | EnsemblPlantsGene:TraesCS5B01G485500 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF325 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.4 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:656839201..656840685
Molecular Weight (calculated)
44776.2 Da
IEP (calculated)
7.582
GRAVY (calculated)
0.754
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPELKVPLL EGRGATPAQT LGNILVSIVG TGVLGLPFAF RAAGWLAGAL GVAAAGAATF YCMLLLLDCR DKLREQETEE DGLGDERRLN RGDGGNYTYG
101: DLGERGFGPV GRYFTEAIII IGQTGGSVAY LVFIGQNLSS VLPALSPPAV VLALLLPAEV ALSFVRSLSA LAPFSILADA CTVLAVAAVV KEDVQLLAKR
201: GRPFAGRSAF AGLWGVPFAC GVAVFCFEGF CLTLALEASM SNRGRFRPVL FQAIVGVTIV YISFGVCGYL AYGDDTRDIV TLNLPDNWST AAVKVVLCVG
301: LALTFAVMMY PIHEIVEARL LAPGGWVRRR CGGVVQRAAL HLSRVAVVAA LAAIACFVPA FGDFVAFVGS TVCALLSFVL PALFHLRFVG PTASPWARAV
401: DYFLLLAGLV FAGHGMYTVL APIYN
101: DLGERGFGPV GRYFTEAIII IGQTGGSVAY LVFIGQNLSS VLPALSPPAV VLALLLPAEV ALSFVRSLSA LAPFSILADA CTVLAVAAVV KEDVQLLAKR
201: GRPFAGRSAF AGLWGVPFAC GVAVFCFEGF CLTLALEASM SNRGRFRPVL FQAIVGVTIV YISFGVCGYL AYGDDTRDIV TLNLPDNWST AAVKVVLCVG
301: LALTFAVMMY PIHEIVEARL LAPGGWVRRR CGGVVQRAAL HLSRVAVVAA LAAIACFVPA FGDFVAFVGS TVCALLSFVL PALFHLRFVG PTASPWARAV
401: DYFLLLAGLV FAGHGMYTVL APIYN
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.