Factsheet for TraesCS5A01G472600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
peroxisome 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G485300.1	Wheat	plasma membrane	96.47	97.16
TraesCS5B01G485500.1	Wheat	plasma membrane	96.0	96.0
HORVU5Hr1G112210.1	Barley	plasma membrane	94.35	94.35
TraesCS5A01G472500.1	Wheat	plasma membrane	89.65	90.5
Os03t0817200-01	Rice	plasma membrane	77.41	78.71
EER93207	Sorghum	plasma membrane	74.12	73.94
TraesCS5A01G176900.1	Wheat	plasma membrane	59.53	60.09
TraesCS2A01G279700.1	Wheat	plasma membrane	58.82	59.52
KRH68062	Soybean	plasma membrane	51.29	51.9
CDY08487	Canola	plasma membrane	49.88	50.84
KRG96325	Soybean	plasma membrane	50.35	50.71
CDY01068	Canola	plasma membrane	49.88	50.6
CDX73848	Canola	plasma membrane	50.59	50.47
Bra001425.1-P	Field mustard	plasma membrane	50.59	50.47
CDY53922	Canola	plasma membrane	50.35	50.23
Bra034803.1-P	Field mustard	plasma membrane	49.88	49.65
AT3G11900.2	Thale cress	plasma membrane	50.35	49.54
VIT_05s0062g01130.t01	Wine grape	plasma membrane	37.41	49.53
GSMUA_Achr1P27880_001	Banana	nucleus, peroxisome, plasma membrane	37.18	45.27
TraesCS6A01G254100.1	Wheat	plasma membrane	34.35	34.68
TraesCS2A01G403800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	33.18	33.33
TraesCS4A01G018500.1	Wheat	peroxisome, plasma membrane, vacuole	25.65	25.29
TraesCS2A01G339100.1	Wheat	plasma membrane	25.18	25.18
TraesCS4A01G018400.1	Wheat	peroxisome, plasma membrane, vacuole	24.94	24.59
TraesCS2A01G338800.1	Wheat	plasma membrane	25.18	23.94
TraesCS2A01G338600.1	Wheat	plasma membrane	24.71	23.86
TraesCS4A01G018300.1	Wheat	peroxisome, plasma membrane, vacuole	22.59	23.65
TraesCS7A01G188100.1	Wheat	plasma membrane	21.88	23.31
TraesCS2A01G282000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	21.88	22.85
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	23.76	21.17
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	24.71	19.85
TraesCS4A01G240700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	20.24	19.03
TraesCS2A01G052500.1	Wheat	plasma membrane	24.71	18.95
TraesCS5A01G081500.1	Wheat	plasma membrane	25.41	18.09
TraesCS6A01G002400.1	Wheat	cytosol, nucleus, plasma membrane	23.53	17.67
TraesCS2A01G279600.1	Wheat	plasma membrane	0.71	0.85

Protein Annotations

EnsemblPlants:TraesCS5A01G472600.1	EnsemblPlantsGene:TraesCS5A01G472600	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF325	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.4	:	:	:

Description

No Description!

Coordinates

chr5A:+:649426824..649428306

Molecular Weight (calculated)

44677.0 Da

IEP (calculated)

6.953

GRAVY (calculated)

0.754

Length

425 amino acids

Sequence
(BLAST)

001: MAPEVKVPLL EGRGATPAQT LGNIVVSIVG TGVLGLPYAF RTAGWLAGAL GVAGAGAATF YCMLLLLDCR DKLREQETEE DGLGDEQRRH GDGGNYTYGD
101: LGERGFGPIG RYFTEAIIII GQTGGSVAYL VFIGQNLSSV LPTLSPPAVV LALLLPAEVA LSFVRSLSAL APFSILADAC TVLAVAAVVK EDVQLLAERG
201: RPFAGRSAFA GLWGVPFACG VAVFCFEGFC LTLALEASMS NRGRFRPVLF QAIVGVTVVY IGFGVCGYLA YGDATRDIVT LNLPDNWSTA AVKVVLCVGL
301: ALTFAVMMYP IHEIVEARLL APGGWVRRRC GGVVQRAALH LSRVAVVAAL AAIACFVPAF GDFVAFVGST VCALLSFVLP ALFHLSFVGP TASPWARAVD
401: YFLLLAGLVF AGHGMYTVLA PIYKL

Best Arabidopsis Sequence Match ( AT2G42005.1 )
(BLAST)

001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE

Arabidopsis Description

AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.