Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G324300.1 | Wheat | plasma membrane | 97.54 | 97.54 |
| HORVU2Hr1G080420.1 | Barley | plasma membrane | 89.04 | 93.65 |
| HORVU2Hr1G080390.1 | Barley | plasma membrane | 89.04 | 93.65 |
| TraesCS2B01G343200.2 | Wheat | plasma membrane | 85.68 | 84.73 |
| TraesCS2A01G339100.1 | Wheat | plasma membrane | 76.96 | 80.94 |
| Os04t0460200-01 | Rice | endoplasmic reticulum | 43.62 | 79.27 |
| TraesCS2A01G338600.1 | Wheat | plasma membrane | 60.4 | 61.36 |
| VIT_01s0026g02500.t01 | Wine grape | plasma membrane | 51.9 | 56.45 |
| Solyc05g050440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 21.48 | 56.14 |
| Solyc05g053970.2.1 | Tomato | plasma membrane | 43.85 | 55.68 |
| TraesCS4A01G018500.1 | Wheat | peroxisome, plasma membrane, vacuole | 51.45 | 53.36 |
| PGSC0003DMT400019843 | Potato | peroxisome, plasma membrane, plastid, vacuole | 17.67 | 52.67 |
| TraesCS7A01G188100.1 | Wheat | plasma membrane | 46.98 | 52.63 |
| TraesCS4A01G018400.1 | Wheat | peroxisome, plasma membrane, vacuole | 50.56 | 52.44 |
| TraesCS2A01G282000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 47.43 | 52.09 |
| Solyc06g061270.1.1 | Tomato | cytosol, plasma membrane | 24.38 | 51.9 |
| Solyc06g061260.1.1 | Tomato | plasma membrane | 21.25 | 49.22 |
| TraesCS4A01G018300.1 | Wheat | peroxisome, plasma membrane, vacuole | 44.52 | 49.01 |
| KRG89633 | Soybean | plasma membrane | 43.62 | 47.91 |
| PGSC0003DMT400082135 | Potato | plasma membrane | 10.29 | 45.1 |
| TraesCS6A01G348300.2 | Wheat | cytosol, plasma membrane, vacuole | 39.82 | 37.32 |
| TraesCS6A01G348400.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.28 | 35.73 |
| TraesCS2A01G052500.1 | Wheat | plasma membrane | 42.73 | 34.48 |
| TraesCS6A01G002400.1 | Wheat | cytosol, nucleus, plasma membrane | 39.37 | 31.1 |
| TraesCS4A01G240700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 31.32 | 30.97 |
| TraesCS5A01G081500.1 | Wheat | plasma membrane | 40.04 | 29.98 |
| TraesCS5A01G472500.1 | Wheat | plasma membrane | 23.94 | 25.42 |
| TraesCS5A01G472600.1 | Wheat | plasma membrane | 23.94 | 25.18 |
| TraesCS6A01G254100.1 | Wheat | plasma membrane | 23.27 | 24.7 |
| TraesCS5A01G176900.1 | Wheat | plasma membrane | 21.92 | 23.28 |
| TraesCS2A01G403800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 21.92 | 23.17 |
| TraesCS2A01G279700.1 | Wheat | plasma membrane | 20.13 | 21.43 |
| TraesCS2A01G279600.1 | Wheat | plasma membrane | 0.67 | 0.85 |
| Os04t0460300-01 | Rice | plastid | 0.45 | 0.44 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G338800.1 | EnsemblPlantsGene:TraesCS2A01G338800 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF465 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.7 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:572746865..572748390
Molecular Weight (calculated)
46934.3 Da
IEP (calculated)
8.393
GRAVY (calculated)
0.799
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNRDPKYIP ISVSARSDCA VQMSYDVPLL GAQEATRPGK APHGGGQDDG NASFVRTCLN GTNGLAGVGL LSMPYALAEG GWLSLALLAA VAATCWYTGL
101: LLGRCMAADQ AIRTYPDIGE RAFGRRGRLV VSAFMYAELY LVAIGFLILD GDNLDKLFPG ASVHLGPVSL AGKQLFVVLV ALMVAPTTWL RSLGVLAYVS
201: AAGVFASVAI VLSVLWAAAV DGVGFSGRGT TTPLRLTGLP TALGLYTFCY CTHAVFPTLY TSMKQKSQFP KMLAICFVLC TLNYGSMAVL GYLMYGDGVQ
301: SQVTLNLPAA RLSSKIAIYT TVVMPFSKYA LVVTPIAVAI EERFRGVVGE GAAASVAVRT LLVLSTVVVA IALPFFGYLM ALVGSLLSVC ACMLLPCLCY
401: VRIFGATSLT ALETASIVGI LVLGLLVAIT GTYSSLVQII HELQVGV
101: LLGRCMAADQ AIRTYPDIGE RAFGRRGRLV VSAFMYAELY LVAIGFLILD GDNLDKLFPG ASVHLGPVSL AGKQLFVVLV ALMVAPTTWL RSLGVLAYVS
201: AAGVFASVAI VLSVLWAAAV DGVGFSGRGT TTPLRLTGLP TALGLYTFCY CTHAVFPTLY TSMKQKSQFP KMLAICFVLC TLNYGSMAVL GYLMYGDGVQ
301: SQVTLNLPAA RLSSKIAIYT TVVMPFSKYA LVVTPIAVAI EERFRGVVGE GAAASVAVRT LLVLSTVVVA IALPFFGYLM ALVGSLLSVC ACMLLPCLCY
401: VRIFGATSLT ALETASIVGI LVLGLLVAIT GTYSSLVQII HELQVGV
001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
Arabidopsis Description
AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.