Factsheet for TraesCS2D01G324300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
golgi 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G338800.1	Wheat	plasma membrane	97.54	97.54
HORVU2Hr1G080420.1	Barley	plasma membrane	89.04	93.65
HORVU2Hr1G080390.1	Barley	plasma membrane	89.04	93.65
TraesCS2B01G343200.2	Wheat	plasma membrane	86.58	85.62
TraesCS2D01G324000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	76.96	80.94
Os04t0460200-01	Rice	endoplasmic reticulum	43.18	78.46
TraesCS2D01G324400.2	Wheat	plasma membrane	58.84	59.77
VIT_01s0026g02500.t01	Wine grape	plasma membrane	51.9	56.45
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	21.48	56.14
Solyc05g053970.2.1	Tomato	plasma membrane	42.95	54.55
TraesCS4D01G284600.1	Wheat	peroxisome, plasma membrane, vacuole	52.35	54.17
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	17.67	52.67
TraesCS7D01G189100.1	Wheat	plasma membrane	46.31	51.88
TraesCS2D01G280800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.76	51.35
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	23.94	50.95
TraesCS4D01G284500.1	Wheat	plasma membrane	40.94	49.73
Solyc06g061260.1.1	Tomato	plasma membrane	20.81	48.19
KRG89633	Soybean	plasma membrane	43.62	47.91
PGSC0003DMT400082135	Potato	plasma membrane	9.84	43.14
TraesCS6D01G331300.1	Wheat	plasma membrane	40.27	34.95
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	41.83	34.82
TraesCS6D01G003200.1	Wheat	cytosol, nucleus, plasma membrane	39.6	31.05
TraesCS5D01G091100.1	Wheat	plasma membrane	40.27	30.2
TraesCS4D01G072600.1	Wheat	mitochondrion, plasma membrane	31.1	29.76
TraesCS5D01G485300.1	Wheat	plasma membrane	23.94	25.36
TraesCS5D01G485100.1	Wheat	plasma membrane	23.49	24.94
TraesCS6D01G235500.1	Wheat	plasma membrane	22.6	23.99
TraesCS2D01G400900.1	Wheat	plasma membrane	21.25	22.46
TraesCS5D01G180000.1	Wheat	plastid	18.57	21.5
TraesCS2D01G278600.1	Wheat	plasma membrane	20.13	21.43
Os04t0460300-01	Rice	plastid	0.22	0.22

Protein Annotations

EnsemblPlants:TraesCS2D01G324300.1	EnsemblPlantsGene:TraesCS2D01G324300	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF465	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr2D:+:417183533..417185091

Molecular Weight (calculated)

46932.3 Da

IEP (calculated)

8.508

GRAVY (calculated)

0.776

Length

447 amino acids

Sequence
(BLAST)

001: MSNRDPKYIP VSVSARSDCA VPMSYDVPLL GAQEATRPGK APQGGAQDDG NASFVRTCLN GTNGLAGVGL LSMPYALAEG GWLSLALLAA VAATCWYTGL
101: LLGRCMAADQ AIRTYPDIGE RAFGRRGRLV VSAFMYAELY LVAIGFLILD GDNLDKLFPG ASVRLGPASL AGKQLFVVLV ALMVAPTTWL RSLGVLAYVS
201: AAGVFASVAI VLSVLWAAAV DGVGFSGRGN TTPLRLTGLP TALGLYTFCY CTHAVFPTLY TSMKQKSQFP KMLAICFVLC TLNYGSMAVL GYLMYGDGVQ
301: SQVTLNLPAA RLSSKIAIYT TVVMPFSKYA LVVTPIAVAI EERFRGVVGE GAAASVAVRT LLVLSTVVVA IALPFFGYLM ALVGSLLSVC ACMLLPCLCY
401: VRIFGATSLT ASETASIIGI LMLGLLVAIT GTYSSLVQII HELQLGV

Best Arabidopsis Sequence Match ( AT5G15240.1 )
(BLAST)

001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF

Arabidopsis Description

AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.