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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • peroxisome 1
  • mitochondrion 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plasma membrane, plastid, vacuole
ChloroP:plastid
iPSORT:plastid
MultiLoc:peroxisome
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G173000.1 Wheat plasma membrane 90.41 82.9
TraesCS5A01G176900.1 Wheat plasma membrane 90.41 82.9
HORVU5Hr1G053550.1 Barley plasma membrane 87.31 80.05
TraesCS2D01G278600.1 Wheat plasma membrane 71.76 65.95
EER98235 Sorghum plastid 72.54 65.12
Zm00001d019225_P001 Maize plasma membrane 72.02 64.95
GSMUA_Achr1P27880_001 Banana nucleus, peroxisome, plasma membrane 47.67 52.72
TraesCS5D01G485100.1 Wheat plasma membrane 56.74 52.02
TraesCS5D01G485300.1 Wheat plasma membrane 56.22 51.42
CDY08487 Canola plasma membrane 48.96 45.32
CDY01068 Canola plasma membrane 48.19 44.39
Bra034803.1-P Field mustard plasma membrane 48.7 44.03
Bra001425.1-P Field mustard plasma membrane 48.19 43.66
CDX73848 Canola plasma membrane 48.19 43.66
KRH68062 Soybean plasma membrane 47.41 43.57
CDY53922 Canola plasma membrane 47.93 43.43
KRG96325 Soybean plasma membrane 47.41 43.36
AT3G11900.2 Thale cress plasma membrane 48.45 43.29
VIT_05s0062g01130.t01 Wine grape plasma membrane 34.46 41.43
TraesCS6D01G235500.1 Wheat plasma membrane 33.94 31.12
TraesCS2D01G400900.1 Wheat plasma membrane 33.42 30.5
TraesCS7D01G189100.1 Wheat plasma membrane 23.32 22.56
TraesCS2D01G324000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 22.8 20.71
TraesCS2D01G280800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 21.24 20.15
TraesCS4D01G284500.1 Wheat plasma membrane 18.13 19.02
TraesCS4D01G284600.1 Wheat peroxisome, plasma membrane, vacuole 20.98 18.75
TraesCS2D01G324300.1 Wheat plasma membrane 21.5 18.57
TraesCS2D01G324400.2 Wheat plasma membrane 20.98 18.41
TraesCS4D01G072600.1 Wheat mitochondrion, plasma membrane 19.69 16.27
TraesCS5D01G091100.1 Wheat plasma membrane 24.09 15.6
TraesCS6D01G331300.1 Wheat plasma membrane 20.73 15.53
TraesCS6D01G331400.2 Wheat cytosol, peroxisome, plasma membrane 20.98 15.08
TraesCS6D01G003200.1 Wheat cytosol, nucleus, plasma membrane 21.24 14.39
Protein Annotations
EnsemblPlants:TraesCS5D01G180000.1EnsemblPlantsGene:TraesCS5D01G180000InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF462PFAM:PF01490
SEG:segTMHMM:TMhelixMapMan:24.2.3.4.4:::
Description
No Description!
Coordinates
chr5D:-:280305268..280309646
Molecular Weight (calculated)
41983.5 Da
IEP (calculated)
6.228
GRAVY (calculated)
0.666
Length
386 amino acids
Sequence
(BLAST)
001: MVVSIVGTGC WACPTPSAPP AGSREPSESP PPAAPRSTAC SSSSVECRDK LEEEETEEPC DVLYTYGDLG QKCFGTIGRC STEILIFLSQ AGGSVAYLIF
101: IAQNLHSMLT QFMSPDTFIF AILLPMQIAL SFVRSLSSLS PFSIFADACN VLAMAIVIKE DIRLFDHPFA DRSAFNGLWA IPFSFGVALF CFEGFSMTLA
201: LEASMAERKK FKWVLSQALV CIMFVYACFG VCGYLAYGEA TKDIVTLNLP NSWSSSAVKI GLCIALAFTF PVMMHPIHEI VEARIRSSRC FQKFSQNVGG
301: PNWLALHASR IMVVIILAVV ASYVPAFGAF IAFVGSTVCA LLAFVLPTAF HLSIVGSSMS LWRRLLDYGF LLFGLVFVVY GTFTAL
Best Arabidopsis Sequence Match ( AT2G42005.1 )
(BLAST)
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.