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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G348300.2 Wheat cytosol, plasma membrane, vacuole 88.74 95.81
TraesCS6D01G331400.2 Wheat cytosol, peroxisome, plasma membrane 86.99 83.43
HORVU6Hr1G083720.2 Barley plastid 87.18 77.15
TraesCS6B01G381900.1 Wheat plasma membrane 76.12 76.71
Zm00001d018336_P002 Maize plasma membrane 75.34 70.93
Zm00001d052063_P003 Maize plasma membrane 74.37 70.93
EES07655 Sorghum plasma membrane 75.73 70.78
Os02t0788800-01 Rice cytosol, peroxisome, plasma membrane 38.64 61.61
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 62.72 59.81
Bra000217.1-P Field mustard plasma membrane 57.09 56.54
CDY35425 Canola plasma membrane 57.09 56.54
PGSC0003DMT400080507 Potato peroxisome 57.28 56.41
CDY22507 Canola plasma membrane 56.7 56.15
CDY23868 Canola cytosol, nucleus, plasma membrane 57.28 55.77
Bra004605.1-P Field mustard cytosol, nucleus, plasma membrane 57.28 55.77
CDX79951 Canola cytosol, nucleus, plasma membrane 57.28 55.77
AT2G41190.1 Thale cress cytosol, peroxisome, plasma membrane 57.86 55.6
CDY06942 Canola cytosol, peroxisome, plasma membrane 57.09 55.06
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 56.89 54.87
CDY67831 Canola cytosol, peroxisome, plasma membrane 56.7 54.78
Solyc03g078150.2.1 Tomato peroxisome 55.34 54.29
VIT_08s0007g05210.t01 Wine grape plasma membrane 53.98 53.77
KRH16006 Soybean cytosol 34.17 51.61
KRH33027 Soybean plasma membrane 56.5 49.91
KRG95106 Soybean cytosol, peroxisome, plasma membrane 43.88 49.13
KRH71933 Soybean cytosol, peroxisome, plasma membrane 42.52 49.1
KRH66774 Soybean plasma membrane 24.47 47.19
KRH77523 Soybean cytosol, nucleus, plasma membrane 40.97 44.61
TraesCS7D01G189100.1 Wheat plasma membrane 33.4 43.11
TraesCS2D01G324400.2 Wheat plasma membrane 35.34 41.36
TraesCS2D01G324000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 33.98 41.18
TraesCS2D01G280800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 32.04 40.54
TraesCS2D01G324300.1 Wheat plasma membrane 34.95 40.27
TraesCS6D01G003200.1 Wheat cytosol, nucleus, plasma membrane 43.11 38.95
TraesCS4D01G284600.1 Wheat peroxisome, plasma membrane, vacuole 30.1 35.88
TraesCS5D01G091100.1 Wheat plasma membrane 39.03 33.72
TraesCS4D01G284500.1 Wheat plasma membrane 24.08 33.7
TraesCS4D01G072600.1 Wheat mitochondrion, plasma membrane 28.16 31.05
TraesCS6D01G235500.1 Wheat plasma membrane 20.58 25.18
TraesCS2D01G400900.1 Wheat plasma membrane 20.39 24.82
TraesCS5D01G485300.1 Wheat plasma membrane 20.0 24.41
TraesCS5D01G485100.1 Wheat plasma membrane 19.61 23.99
TraesCS2D01G278600.1 Wheat plasma membrane 18.64 22.86
TraesCS5D01G180000.1 Wheat plastid 15.53 20.73
Protein Annotations
EnsemblPlants:TraesCS6D01G331300.1EnsemblPlantsGene:TraesCS6D01G331300InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF358PFAM:PF01490
SEG:segTMHMM:TMhelixMapMan:24.2.3.4.7:::
Description
No Description!
Coordinates
chr6D:-:434169366..434174778
Molecular Weight (calculated)
55809.4 Da
IEP (calculated)
5.095
GRAVY (calculated)
0.636
Length
515 amino acids
Sequence
(BLAST)
001: MLLGDGDIEE SPRESFHDGD GDGELVRVPS VAAQLTTVMV KAWCLFCRET TDTYTIAASP ILGYLGPSMS TYSIDDGRSG LASDLKLPFI LDKLEPVESP
101: RRHLLGSVQD EDLSFQYTKE IDVRQGCSVT QTVFNGINVL AGVGLLSTPS TIHEAGWAGL AVLSAFAIIC CYTGVLLKHC FESKDGISTY PDIGEAAFGR
201: IGRLIISIIL YTELYSYCVE FIILEGDNIT SIFPDVNLTL FGIHVDSRHF FGILTALVVL PTVWLRDLRV LSFLSAGGII ATLVVFVSVA LVGTTEGVGF
301: HPTGEAVKWS GMPFAIGVYG FCYCGHSVFP NIYQSMSDRT KFTKALFICF TICTAIYGSF AIIGYLMFGD KTLSQITLNL PKESFASKVA LWTTVINPFT
401: KFALLLNPVA RSLEELRPEG FLNETICFII LRTSLVASTV VIAFLLPFFG LVMALIGSLL SILVAVIMPA LCFLKITQNK ATRTQVITSV AIIVVGVISA
501: ALGTYSSVAS IIGYY
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.