Factsheet for Solyc03g078150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
plasma membrane 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080507	Potato	peroxisome	92.95	93.31
VIT_08s0007g05210.t01	Wine grape	plasma membrane	63.62	64.6
Bra000217.1-P	Field mustard	plasma membrane	63.05	63.65
CDY35425	Canola	plasma membrane	63.05	63.65
CDY22507	Canola	plasma membrane	62.86	63.46
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	62.29	61.01
CDY06942	Canola	cytosol, peroxisome, plasma membrane	61.71	60.67
CDY67831	Canola	cytosol, peroxisome, plasma membrane	61.52	60.6
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.52	60.49
KRH16006	Soybean	cytosol	39.05	60.12
CDY23868	Canola	cytosol, nucleus, plasma membrane	59.81	59.36
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	59.62	59.17
CDX79951	Canola	cytosol, nucleus, plasma membrane	59.62	59.17
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	53.14	58.49
Solyc03g063030.2.1	Tomato	plasma membrane	25.71	57.45
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	58.29	56.67
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	55.81	55.39
TraesCS6D01G331300.1	Wheat	plasma membrane	54.29	55.34
EES07657	Sorghum	plasma membrane	54.67	54.98
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	55.81	54.56
EES07655	Sorghum	plasma membrane	57.14	54.45
Zm00001d018336_P002	Maize	plasma membrane	56.57	54.3
KRH77523	Soybean	cytosol, nucleus, plasma membrane	48.57	53.91
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	55.05	53.72
Zm00001d052063_P003	Maize	plasma membrane	54.86	53.33
TraesCS6B01G381900.1	Wheat	plasma membrane	51.43	52.84
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	46.29	52.83
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	52.95	52.65
HORVU6Hr1G083720.2	Barley	plastid	55.24	49.83
KRH66774	Soybean	plasma membrane	25.33	49.81
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	29.33	47.68
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	14.67	45.03
Solyc05g053970.2.1	Tomato	plasma membrane	29.71	44.32
Solyc03g063040.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	9.71	41.46
Solyc11g008440.1.1	Tomato	cytosol, nucleus, plasma membrane	43.43	41.08
Solyc06g061260.1.1	Tomato	plasma membrane	15.05	40.93
Solyc03g013440.2.1	Tomato	plasma membrane	25.71	39.02
Solyc10g084830.1.1	Tomato	cytosol, peroxisome, plasma membrane	39.05	38.75
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	15.43	38.57
Solyc03g013160.2.1	Tomato	plasma membrane	30.86	38.03
Solyc09g098380.1.1	Tomato	plasma membrane	25.14	29.86
Solyc03g063050.1.1	Tomato	extracellular, plasma membrane	15.05	29.7
Solyc03g032090.1.1	Tomato	plasma membrane	18.67	22.95
Solyc02g082510.1.1	Tomato	plasma membrane	17.9	22.12
Solyc10g048180.1.1	Tomato	plasma membrane	17.33	21.31
Solyc02g082520.1.1	Tomato	cytosol, peroxisome, plasma membrane	16.95	21.24

Protein Annotations

MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	UniProt:K4BHP5	PFAM:PF01490
PANTHER:PTHR22950	PANTHER:PTHR22950:SF358	EnsemblPlantsGene:Solyc03g078150.2	EnsemblPlants:Solyc03g078150.2.1	TMHMM:TMhelix	UniParc:UPI0002767DC2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:50131086..50138379

Molecular Weight (calculated)

57416.0 Da

IEP (calculated)

4.642

GRAVY (calculated)

0.527

Length

525 amino acids

Sequence
(BLAST)

001: MSKKDEEFLD YLTDNDSDDV EANSVNMSDD DDDEEEEENA PFASQQWPQS FRESINSYTI AASPNFGFIR RGSSIIPESD TKGFLDSDLK THLLPEKEKI
101: QEQNVADGIS VTKASLLEKA SSLHEQLTGE LPIPYGCSLT QTVFNGVNVM AGVGLLSVPC TVKEAGWASL LVLVIFAVIC WYTASLMKHC FESREGILTY
201: PDIGEAAFGK FGRIIISIIL YVELYSYCVE FIILEGDNLT SLFPGSSLNW GGLKLDSIHI FGILAALIIL PTVWLRDLHV ISYLSACGVF ATMIIVLCVI
301: FLGTVDGVGF HNTSQVVNWS GIPFSIGVYG FCYSGHSVFP NIYQSMADKS KFNVALIICF ILCILIYGGV AIMGYLMFGQ STLSQITLNM PNNSIASKVA
401: VWTTVISPFT KYALLMNPLG RCIEELLPER ISSSLWCFLL LRTALVFSTV CVAFLLPFFG LVMALIGSLF SILVSIIIPA LCYLKIIGKK ATRTQRVSSI
501: SVIALGIVCA ALGTYSSLSG IANKY

Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.