Factsheet for GSMUA_Achr11P09830_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	64.26	65.6
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	57.78	65.41
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	64.63	64.99
Zm00001d018336_P002	Maize	plasma membrane	65.56	64.72
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	64.44	64.68
EES07655	Sorghum	plasma membrane	65.56	64.25
Zm00001d052063_P003	Maize	plasma membrane	63.7	63.7
TraesCS6D01G331300.1	Wheat	plasma membrane	59.81	62.72
TraesCS6B01G381900.1	Wheat	plasma membrane	57.78	61.06
EES07657	Sorghum	plasma membrane	57.96	59.96
Bra000217.1-P	Field mustard	plasma membrane	57.59	59.81
CDY35425	Canola	plasma membrane	57.59	59.81
HORVU6Hr1G083720.2	Barley	plastid	64.26	59.62
CDY22507	Canola	plasma membrane	57.41	59.62
CDY06942	Canola	cytosol, peroxisome, plasma membrane	58.52	59.18
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.33	58.99
CDY67831	Canola	cytosol, peroxisome, plasma membrane	58.15	58.91
PGSC0003DMT400080507	Potato	peroxisome	57.04	58.89
VIT_08s0007g05210.t01	Wine grape	plasma membrane	56.3	58.8
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	57.22	58.41
CDX79951	Canola	cytosol, nucleus, plasma membrane	57.22	58.41
CDY23868	Canola	cytosol, nucleus, plasma membrane	57.22	58.41
Solyc03g078150.2.1	Tomato	peroxisome	56.67	58.29
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	57.78	58.21
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	33.7	56.35
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	55.0	56.25
KRH16006	Soybean	cytosol	34.81	55.13
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	44.63	54.04
KRH33027	Soybean	plasma membrane	58.15	53.86
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	44.26	51.96
KRH77523	Soybean	cytosol, nucleus, plasma membrane	42.78	48.84
KRH66774	Soybean	plasma membrane	23.15	46.82
GSMUA_Achr10P...	Banana	plasma membrane	34.26	42.05
GSMUA_Achr6P34060_001	Banana	plasma membrane	42.78	41.85
GSMUA_Achr5P10650_001	Banana	cytosol, nucleus, plasma membrane	42.59	41.52
GSMUA_Achr7P18140_001	Banana	plasma membrane	32.59	41.41
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	41.85	40.14
GSMUA_Achr6P35440_001	Banana	plasma membrane	31.3	38.85
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	26.48	30.23
GSMUA_Achr1P02810_001	Banana	cytosol, plasma membrane, vacuole	18.89	25.89
GSMUA_Achr4P25490_001	Banana	plasma membrane	18.33	25.26
GSMUA_Achr5P11060_001	Banana	plasma membrane	17.96	24.49
GSMUA_AchrUn_...	Banana	plasma membrane, plastid, vacuole	17.78	22.97
GSMUA_Achr1P27880_001	Banana	nucleus, peroxisome, plasma membrane	14.81	22.92

Protein Annotations

EnsemblPlants:GSMUA_Achr11P09830_001	EnsemblPlants:GSMUA_Achr11T09830_001	EnsemblPlantsGene:GSMUA_Achr11G09830_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF358	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002954AC5
UniProt:M0RQW3	MapMan:24.2.3.4.7	:	:	:	:

Description

transmembrane amino acid transporter protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G09830_001]

Coordinates

chr11:-:7653930..7664226

Molecular Weight (calculated)

59099.3 Da

IEP (calculated)

5.053

GRAVY (calculated)

0.352

Length

540 amino acids

Sequence
(BLAST)

001: MENSTARGEK DVELFFDDDS TDADIDEEVA EYKSDGENEE GNEEEGEERE RSSSFYSQQW PQSFRETIDS YTISASPAFG YVGPIPSLRY SSLDIHSQSA
101: QDSDMKLPLL SGSIYEKQES DKNFRRSLTS TPDVSVSFKV QSSGEGYIHH GCSVTQTVFN GVNVLAGVGL LSTPFSLKEA GWASMALLVL FAAICCYTGI
201: LMKHCFESKD GIFSYPDIGE AAFGRFGRLF ISVILYTELY AYCVEFIILE GDNLNKIFPG AAIEWAGIHI DSVHLFGMLT ALIVLPTVWL RDLRIISYLS
301: AGGVVATILV FVSVFFVGTM DGIGFHHTGK AVNWGGLPFA IGVYGFCFSG HSVFPNIYQS MSDRSKFNRA LLICFALCTA IYGSFATLGY RMFGDGTLSQ
401: ITLNLPKHTF ASKVAIWTTV INPFTKYALL LNPLARSLEE LLPPRTADTI WCSILLRTTL VVSTVCIAFI LPFFGLVMAL IGSLLSILVA IVMPALCFLK
501: IFKNKAKPLQ IVLGTTIAAL GIISAALGTY SSISRIASSY

Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.