Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 52.87 | 54.25 |
| Os05t0364700-00 | Rice | extracellular | 18.85 | 53.25 |
| Os01t0597400-00 | Rice | cytosol, peroxisome, plasma membrane | 53.1 | 52.14 |
| TraesCS4A01G018500.1 | Wheat | peroxisome, plasma membrane, vacuole | 51.49 | 51.97 |
| TraesCS4B01G285800.1 | Wheat | peroxisome, plasma membrane, vacuole | 51.26 | 51.74 |
| GSMUA_Achr10P... | Banana | plasma membrane | 52.18 | 51.59 |
| TraesCS4D01G284600.1 | Wheat | peroxisome, plasma membrane, vacuole | 51.03 | 51.39 |
| TraesCS4B01G285500.1 | Wheat | plasma membrane | 50.8 | 51.28 |
| OQU87120 | Sorghum | peroxisome, plasma membrane, vacuole | 52.18 | 51.24 |
| GSMUA_Achr7P18140_001 | Banana | plasma membrane | 49.43 | 50.59 |
| TraesCS4A01G018400.1 | Wheat | peroxisome, plasma membrane, vacuole | 50.11 | 50.58 |
| EES01014 | Sorghum | plasma membrane | 50.11 | 50.23 |
| TraesCS4A01G018300.1 | Wheat | peroxisome, plasma membrane, vacuole | 45.52 | 48.77 |
| TraesCS4D01G284500.1 | Wheat | plasma membrane | 40.0 | 47.28 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 38.85 | 31.3 |
| GSMUA_Achr6P34060_001 | Banana | plasma membrane | 37.7 | 29.71 |
| GSMUA_Achr5P10650_001 | Banana | cytosol, nucleus, plasma membrane | 37.01 | 29.06 |
| GSMUA_Achr1P03170_001 | Banana | cytosol, nucleus, plasma membrane | 36.55 | 28.24 |
| GSMUA_Achr6P06880_001 | Banana | mitochondrion, plasma membrane, plastid | 30.11 | 27.7 |
| Zm00001d044387_P001 | Maize | nucleus | 51.49 | 26.17 |
| GSMUA_Achr1P02810_001 | Banana | cytosol, plasma membrane, vacuole | 21.15 | 23.35 |
| GSMUA_Achr5P11060_001 | Banana | plasma membrane | 20.23 | 22.22 |
| GSMUA_Achr4P25490_001 | Banana | plasma membrane | 19.31 | 21.43 |
| GSMUA_Achr1P27880_001 | Banana | nucleus, peroxisome, plasma membrane | 16.09 | 20.06 |
| GSMUA_AchrUn_... | Banana | plasma membrane, plastid, vacuole | 19.08 | 19.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P35440_001 | EnsemblPlants:GSMUA_Achr6T35440_001 | EnsemblPlantsGene:GSMUA_Achr6G35440_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | ncoils:Coil | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF465 | PFAM:PF01490 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002966B0B | UniProt:M0TCY7 | MapMan:24.2.3.4.7 | : | : |
Description
Putative Vacuolar amino acid transporter 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G35440_001]
Coordinates
chr6:-:33650330..33652040
Molecular Weight (calculated)
47235.0 Da
IEP (calculated)
8.230
GRAVY (calculated)
0.720
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPNEQFVV VIKEDDAADL RKSLLQTHSD DGFLSSRTSD TKHGTSFART CLNLSNAISG IGVLSLPYAL SLGGWLSLAI FVLVSSICYY TGLLIQRCMD
101: ADPCIKTYPD IGEYAFGRKG KLVISIFMYL ELYLVAVGFL IMEGDNLDKL FPGVCLKFAS VSVQGKQLFI LLSALVILPT TWPRNLGILA YVSAGGVLAS
201: AVLLGSLLWA GIVDTGFHEK GRILDLNGLP TAMGLFFMCF TCHAVFPTIS SSMRDSTRFP KVVSISFVLC TINYALMAIL GYLMYGEKLE SQVTLNLPAG
301: EPYTRIAIYT TLINPITKFA LAMSPISGAI EQQLALCRGR MPGKMPSLLI RTLLLCGTVV IALAIPFFAY LMAFVGSFLS VVVSVLFPCV CYLKIHGVSQ
401: VRRLELVNIL GIVVVGSLVA VIGTYSSLRD IICNR
101: ADPCIKTYPD IGEYAFGRKG KLVISIFMYL ELYLVAVGFL IMEGDNLDKL FPGVCLKFAS VSVQGKQLFI LLSALVILPT TWPRNLGILA YVSAGGVLAS
201: AVLLGSLLWA GIVDTGFHEK GRILDLNGLP TAMGLFFMCF TCHAVFPTIS SSMRDSTRFP KVVSISFVLC TINYALMAIL GYLMYGEKLE SQVTLNLPAG
301: EPYTRIAIYT TLINPITKFA LAMSPISGAI EQQLALCRGR MPGKMPSLLI RTLLLCGTVV IALAIPFFAY LMAFVGSFLS VVVSVLFPCV CYLKIHGVSQ
401: VRRLELVNIL GIVVVGSLVA VIGTYSSLRD IICNR
001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
Arabidopsis Description
AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.