Factsheet for GSMUA_Achr1P02810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, vacuole

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G38250.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11060_001	Banana	plasma membrane	86.04	85.61
GSMUA_AchrUn_...	Banana	plasma membrane, plastid, vacuole	84.26	79.43
GSMUA_Achr4P25490_001	Banana	plasma membrane	75.89	76.28
TraesCS2A01G403800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	70.56	65.72
TraesCS2D01G400900.1	Wheat	plasma membrane	70.3	65.48
TraesCS2B01G421800.1	Wheat	plasma membrane	70.3	65.48
Os04t0565500-01	Rice	cytosol, plasma membrane, plastid	70.56	65.41
TraesCS6B01G271500.1	Wheat	plasma membrane	69.29	64.85
TraesCS6D01G235500.1	Wheat	plasma membrane	69.04	64.61
TraesCS6A01G254100.1	Wheat	plasma membrane	69.04	64.61
HORVU6Hr1G064740.1	Barley	plasma membrane	68.53	64.13
EES07473	Sorghum	plasma membrane	68.53	63.38
Zm00001d017557_P001	Maize	plastid	69.29	63.19
OQU82139	Sorghum	peroxisome	68.78	63.17
CDY70145	Canola	plasma membrane	61.17	59.8
Bra000591.1-P	Field mustard	plasma membrane	60.91	59.41
CDY21456	Canola	plasma membrane	60.66	59.31
VIT_07s0031g02140.t01	Wine grape	plasma membrane	63.2	59.0
EES12671	Sorghum	plastid	72.59	57.66
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	72.33	57.58
VIT_03s0038g03900.t01	Wine grape	plasma membrane	62.18	57.51
PGSC0003DMT400045065	Potato	plasma membrane, plastid	61.42	57.48
AT2G42005.1	Thale cress	plasma membrane	60.15	57.38
AT4G38250.1	Thale cress	plasma membrane	63.2	57.11
PGSC0003DMT400048045	Potato	plasma membrane	60.91	56.21
Os02t0670900-02	Rice	endoplasmic reticulum, plasma membrane, plastid	69.29	56.06
Solyc02g082510.1.1	Tomato	plasma membrane	60.15	55.76
CDY59097	Canola	plastid	62.69	55.76
PGSC0003DMT400086252	Potato	plasma membrane	59.9	55.53
Solyc03g032090.1.1	Tomato	plasma membrane	60.15	55.5
CDY54797	Canola	plastid	61.93	54.83
Bra033558.1-P	Field mustard	plasma membrane	49.24	54.19
Bra029326.1-P	Field mustard	peroxisome	58.12	53.5
AT5G65990.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	57.87	53.4
CDY42861	Canola	peroxisome	57.87	53.27
PGSC0003DMT400094217	Potato	plasma membrane	56.35	52.61
CDY47026	Canola	peroxisome, plastid	57.11	52.2
KRH39423	Soybean	plasma membrane	55.84	51.4
Solyc02g082520.1.1	Tomato	cytosol, peroxisome, plasma membrane	54.57	51.31
Solyc10g048180.1.1	Tomato	plasma membrane	55.33	51.05
KRH28932	Soybean	cytosol, plasma membrane	46.45	50.83
PGSC0003DMT400033422	Potato	plasma membrane	54.06	49.31
GSMUA_Achr1P27880_001	Banana	nucleus, peroxisome, plasma membrane	24.37	27.51
GSMUA_Achr6P35440_001	Banana	plasma membrane	23.35	21.15
GSMUA_Achr7P18140_001	Banana	plasma membrane	22.34	20.71
GSMUA_Achr10P...	Banana	plasma membrane	22.84	20.45
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	25.89	18.89
GSMUA_Achr6P34060_001	Banana	plasma membrane	24.87	17.75
GSMUA_Achr5P10650_001	Banana	cytosol, nucleus, plasma membrane	23.6	16.79
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	23.86	16.7
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	19.8	16.49

Protein Annotations

EnsemblPlants:GSMUA_Achr1P02810_001	EnsemblPlants:GSMUA_Achr1T02810_001	EnsemblPlantsGene:GSMUA_Achr1G02810_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF259	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI000296BBB4	UniProt:M0RWI9	MapMan:24.2.3.4.4	:	:	:

Description

Putative Proton-coupled amino acid transporter 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G02810_001]

Coordinates

chr1:-:2272721..2274307

Molecular Weight (calculated)

41189.0 Da

IEP (calculated)

7.368

GRAVY (calculated)

0.881

Length

394 amino acids

Sequence
(BLAST)

001: MVFGNEACSS SYGLDASAAP LLPSVGGGDL RGRLSSQPKT FANVFIAIVG SGVLGLPYAF RRTGWAAGAL LLLAVAALTF HCMMLIVRTR RRLDLDGSAK
101: IASFGDLGLA VSGSLGRLAV DAMIVLSQAG FCVGYLIFIS SSLTHLLPLS LPFLSSKALY VLAMLPFQLG LNSIRSLTLL APLSIFADVV DLGAMGVVIA
201: EDVSIMVSRP PPIHAFAGPS VLLYGAGVAV YAFEGIGMVL PLEAEAADKS KFGRTLGLSM AFIALLYGLF GVLGYAAFGD DTRDIITTNL GAGVAERWLC
301: GKRYCWWLRW ALVLAVSLAA TLVPNFADFL SLVGSSVCVV LGFVLPAAFH LKVFSGELGW AEATADIAIV VVGMGLAISG TWSSLMSIFN SVQS

Best Arabidopsis Sequence Match ( AT4G38250.1 )
(BLAST)

001: MGFQNEASSS SYTLKIPPPA REDSPLLGKG PPLSSQFKTF ANVFIAVVGA GVLGLPYAFK RTGWLMGVLL LVSVSVLTHH CMMLLVYTRR KLDSFNAGIS
101: KIGSFGDLGF AVCGSLGRIV VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC FPFQLGLNSI KTLTHLAPLS
201: IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD
301: IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE
401: MGWLQWSSDT AIVVLGVVLA VSGTWSSLSE IFSVKV

Arabidopsis Description

AVT3CAmino acid transporter AVT3C [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.