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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G075350.2 Barley endoplasmic reticulum, plasma membrane, vacuole 19.93 63.95
HORVU4Hr1G022660.1 Barley extracellular 24.64 61.54
EES17245 Sorghum cytosol, peroxisome, plasma membrane 54.17 51.91
CDY07919 Canola cytosol, nucleus, plasma membrane 48.01 50.19
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 47.83 50.0
HORVU5Hr1G020560.3 Barley plasma membrane 53.08 49.49
TraesCS5D01G091100.1 Wheat plasma membrane 53.08 49.16
TraesCS5B01G084900.1 Wheat plasma membrane 53.26 49.08
TraesCS5A01G081500.1 Wheat plasma membrane 53.08 49.08
Zm00001d032325_P001 Maize mitochondrion, plasma membrane, vacuole 23.91 48.89
AT5G02170.1 Thale cress plasma membrane 46.2 48.48
Bra009608.1-P Field mustard plasma membrane 48.01 48.45
Solyc10g084830.1.1 Tomato cytosol, peroxisome, plasma membrane 46.2 48.2
AT5G02180.1 Thale cress plasma membrane 48.01 48.18
AT3G09330.1 Thale cress cytosol, nucleus, plasma membrane 45.65 48.09
CDY40336 Canola plasma membrane 47.64 48.08
PGSC0003DMT400028760 Potato cytosol, peroxisome, plasma membrane 46.01 48.02
CDY10463 Canola plasma membrane 47.46 47.99
AT3G09340.1 Thale cress plasma membrane 45.83 47.92
CDY55126 Canola plasma membrane 44.38 47.67
Os12t0574000-01 Rice plasma membrane 51.09 47.47
GSMUA_Achr5P10650_001 Banana cytosol, nucleus, plasma membrane 47.28 47.11
Zm00001d041534_P002 Maize plasma membrane 51.81 46.96
Bra005712.1-P Field mustard plasma membrane 42.39 46.61
Zm00001d030751_P001 Maize plasma membrane 52.9 46.2
GSMUA_Achr1P03170_001 Banana cytosol, nucleus, plasma membrane 47.1 46.18
CDX80808 Canola plasma membrane 20.47 44.66
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 41.85 42.78
GSMUA_Achr7P18140_001 Banana plasma membrane 32.43 42.12
CDY55127 Canola cytosol, plasma membrane, plastid 43.84 41.44
CDX80809 Canola plasma membrane 43.3 40.3
GSMUA_Achr10P... Banana plasma membrane 31.7 39.77
Zm00001d031629_P001 Maize cytosol, plasma membrane, vacuole 12.86 39.44
GSMUA_Achr6P35440_001 Banana plasma membrane 29.71 37.7
GSMUA_Achr6P06880_001 Banana mitochondrion, plasma membrane, plastid 26.99 31.5
GSMUA_Achr1P02810_001 Banana cytosol, plasma membrane, vacuole 17.75 24.87
GSMUA_Achr4P25490_001 Banana plasma membrane 17.21 24.23
GSMUA_Achr5P11060_001 Banana plasma membrane 16.49 22.98
GSMUA_AchrUn_... Banana plasma membrane, plastid, vacuole 16.85 22.25
GSMUA_Achr1P27880_001 Banana nucleus, peroxisome, plasma membrane 13.04 20.63
Protein Annotations
EnsemblPlants:GSMUA_Achr6P34060_001EnsemblPlants:GSMUA_Achr6T34060_001EnsemblPlantsGene:GSMUA_Achr6G34060_001GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF313PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI000295F1FEUniProt:M0TCJ9MapMan:24.2.3.4.7:::
Description
transmembrane amino acid transporter protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G34060_001]
Coordinates
chr6:+:32899374..32903661
Molecular Weight (calculated)
59295.6 Da
IEP (calculated)
5.763
GRAVY (calculated)
0.626
Length
552 amino acids
Sequence
(BLAST)
001: MKTDEEMGPD RGVVFETDDE DNLAHQHGGS DCSPSSSSPS SASSYGDHIG GDPSSYQTTW PQSYRPSIDV FSSVPSPRVG FLAGSSLVRV GSSFLRASMV
101: STHEDELSFT KPFVSYDSVT GHDGAEAIPP PDVPMKSSFA FASYCELPPP HQCSAAQAVV NGINVLCGVG LLSTPYAVKE GGWLGMLLLF CLASISFYTG
201: ILLKRCLDSF PGLKTYPDIG HAAFGLSGRI FISIVLYLEL YGCCVEYIIL VSDSLTFIFP DASISFLGLD LSPHQLFALT TAIAVLPTVW LKNLSVLSYL
301: SAAGVVATIL VIICLLWGGV VDQIGFHPGG RALNLVDLPV ALGLYGFGYS GHSVFPNIYS SMKRPSQFPT VLIICFVLCT IMYSAVAVAG YLMFGDSLKS
401: QFTLNMPRQY LASKVAVWTT VINPLSKYAL TMTPVALSLE ELLPSTSQSN IVMLSLRTFL VLSTLVVALT LPFFGYVMAL LGSVFTMLVA LILPCSCYLS
501: IKRRSVDFIQ ASVCVLIIVI GLVSSFIGSI SSIKQMVNQT LSLCLCMILL SF
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.