Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES17245 Sorghum cytosol, peroxisome, plasma membrane 78.82 83.33
HORVU2Hr1G075350.2 Barley endoplasmic reticulum, plasma membrane, vacuole 23.15 81.98
Zm00001d032325_P001 Maize mitochondrion, plasma membrane, vacuole 34.15 77.04
Zm00001d030751_P001 Maize plasma membrane 78.0 75.16
HORVU4Hr1G022660.1 Barley extracellular 27.09 74.66
TraesCS5A01G081500.1 Wheat plasma membrane 69.29 70.69
TraesCS5D01G091100.1 Wheat plasma membrane 68.97 70.47
TraesCS5B01G084900.1 Wheat plasma membrane 69.29 70.45
HORVU5Hr1G020560.3 Barley plasma membrane 68.14 70.1
Os12t0574000-01 Rice plasma membrane 66.83 68.52
GSMUA_Achr6P34060_001 Banana plasma membrane 46.96 51.81
Zm00001d031629_P001 Maize cytosol, plasma membrane, vacuole 14.12 47.78
Zm00001d043640_P001 Maize plasma membrane 13.14 47.34
Zm00001d044994_P001 Maize cytosol, plasma membrane, vacuole 11.66 46.41
Solyc10g084830.1.1 Tomato cytosol, peroxisome, plasma membrane 38.92 44.8
Zm00001d004340_P002 Maize plasma membrane 41.54 44.39
PGSC0003DMT400028760 Potato cytosol, peroxisome, plasma membrane 38.26 44.05
CDY10463 Canola plasma membrane 39.24 43.77
Zm00001d048577_P001 Maize cytosol, nucleus, plasma membrane 40.72 43.74
AT5G02170.1 Thale cress plasma membrane 37.6 43.54
CDY40336 Canola plasma membrane 39.08 43.51
CDY55126 Canola plasma membrane 36.62 43.39
CDY07919 Canola cytosol, nucleus, plasma membrane 37.6 43.37
Bra009608.1-P Field mustard plasma membrane 38.92 43.33
AT5G02180.1 Thale cress plasma membrane 39.08 43.27
Bra005712.1-P Field mustard plasma membrane 35.47 43.03
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 37.27 42.99
AT3G09340.1 Thale cress plasma membrane 36.78 42.42
Zm00001d037229_P001 Maize plasma membrane 27.75 42.36
AT3G09330.1 Thale cress cytosol, nucleus, plasma membrane 36.29 42.18
CDX80808 Canola plasma membrane 16.75 40.32
Zm00001d037057_P001 Maize cytosol, nucleus, plasma membrane 33.99 39.35
CDY55127 Canola cytosol, plasma membrane, plastid 37.11 38.7
Zm00001d003422_P001 Maize cytosol, plasma membrane, vacuole 28.9 38.43
Zm00001d052063_P003 Maize plasma membrane 33.99 38.33
Zm00001d018336_P002 Maize plasma membrane 34.32 38.21
CDX80809 Canola plasma membrane 36.78 37.77
Zm00001d018340_P001 Maize cytosol, peroxisome, plasma membrane 31.53 36.36
Zm00001d004633_P001 Maize plasma membrane 23.65 31.03
Zm00001d019225_P001 Maize plasma membrane 17.41 24.77
Zm00001d017557_P001 Maize plastid 15.93 22.45
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 15.76 19.39
Zm00001d044387_P001 Maize nucleus 24.79 17.64
Protein Annotations
EnsemblPlants:Zm00001d041534_P002EnsemblPlants:Zm00001d041534_T002EnsemblPlantsGene:Zm00001d041534EntrezGene:103650516GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF249PFAM:PF01490ProteinID:ONM33211.1
SEG:segTMHMM:TMhelixUniParc:UPI00084257B9UniProt:A0A1D6MWS7MapMan:24.2.3.4.7:
Description
Transmembrane amino acid transporter family protein
Coordinates
chr3:+:126106707..126109981
Molecular Weight (calculated)
65677.0 Da
IEP (calculated)
6.405
GRAVY (calculated)
0.336
Length
609 amino acids
Sequence
(BLAST)
001: MDRDEEMGHG DRSLLFVGDE DDDIGTYRDG GFMETSSDEG SFSDPSDGEA RGGRRGGDGS KSAWPQSYRQ SIDMLSVVPS PTVSMLMAAS PNLTRFGSSF
101: LKAGSSFFLR KGDDSVLPLA RPLLPPSLPQ LSQSSLRPQP PMRQSTDILA QPPRPPAGHE AQLPDRPSSA CLRPDYIELP PPASKCSRNQ SIINGFNVLC
201: GVGILSTSYG IKEGGWSSLL LLPLLGGSSC YTGLLLKRCI DSSPNIGTYP DIGQAAFGVA GRIFVSVVLY LELYASCVEY ITLLGDSMSS VFPSAHLAFA
301: GIDMNAHTLF AITTALAILP TVCLRNLSLL SYLSAGGVMA TIAVIVCLFW VGIGEGIGFH FSGALVNVTH LPVALGLYGF CYSGHSVFPN IYSSMKERSQ
401: FPFVLLFCFT VVTVAYAGIA VSGFLMFGES TMSQFTLNLP QQYIPSKIAI WMTIVNPYTK YALTMTPVAL SIEEALPKKM QNYLVGMSVR TCLVLSTVVV
501: ALLFPYFGEQ SCRAGDGIAW ICLHNACGRF WETLSPKPVH CTFLWPIQLN KLLDDLQALI LPCACYLSIK KGAVPLWEII LCIVIIMIGA VCASVGSYTS
601: VSQMISSTR
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.