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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES06091 Sorghum plasma membrane 94.71 93.23
Zm00001d044994_P001 Maize cytosol, plasma membrane, vacuole 23.46 86.93
Os02t0101000-01 Rice cytosol, nucleus, plasma membrane 82.36 81.79
Zm00001d043640_P001 Maize plasma membrane 23.46 78.7
Zm00001d004340_P002 Maize plasma membrane 73.02 72.63
Zm00001d037057_P001 Maize cytosol, nucleus, plasma membrane 63.67 68.63
Solyc03g063030.2.1 Tomato plasma membrane 27.16 65.53
Bra007103.1-P Field mustard plasma membrane 44.27 63.71
GSMUA_Achr1P03170_001 Banana cytosol, nucleus, plasma membrane 60.49 60.92
VIT_13s0019g04660.t01 Wine grape cytosol, nucleus, plasma membrane 58.02 58.44
GSMUA_Achr5P10650_001 Banana cytosol, nucleus, plasma membrane 56.79 58.12
CDX78269 Canola plasma membrane 53.09 56.79
Solyc11g008440.1.1 Tomato cytosol, nucleus, plasma membrane 55.03 56.22
CDY18351 Canola plastid 50.44 56.19
CDY44630 Canola plasma membrane 54.14 55.92
AT2G39130.2 Thale cress cytosol, nucleus, plasma membrane 54.14 55.82
CDX74865 Canola plasma membrane 54.14 55.62
Solyc03g063040.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 11.99 55.28
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 44.8 55.1
PGSC0003DMT400036273 Potato cytosol, nucleus, plasma membrane 43.03 54.95
CDX73443 Canola cytosol, nucleus, plasma membrane 51.85 54.75
Bra017088.1-P Field mustard cytosol, nucleus, plasma membrane 52.56 54.58
CDX93284 Canola cytosol, nucleus, plasma membrane 52.56 54.58
AT3G54830.1 Thale cress nucleus 48.5 50.37
PGSC0003DMT400019190 Potato cytosol, nucleus, plasma membrane 53.26 50.17
Zm00001d037229_P001 Maize plasma membrane 31.75 45.11
Zm00001d032325_P001 Maize mitochondrion, plasma membrane, vacuole 20.28 42.59
Zm00001d003422_P001 Maize cytosol, plasma membrane, vacuole 34.39 42.58
Zm00001d018336_P002 Maize plasma membrane 40.21 41.68
Zm00001d052063_P003 Maize plasma membrane 39.68 41.67
Zm00001d041534_P002 Maize plasma membrane 43.74 40.72
Solyc03g063050.1.1 Tomato extracellular, plasma membrane 19.05 40.6
Zm00001d018340_P001 Maize cytosol, peroxisome, plasma membrane 37.74 40.53
Zm00001d030751_P001 Maize plasma membrane 44.27 39.72
Zm00001d031629_P001 Maize cytosol, plasma membrane, vacuole 11.11 35.0
KRG99991 Soybean cytosol, nucleus, peroxisome 17.11 34.04
Zm00001d004633_P001 Maize plasma membrane 25.75 31.47
Zm00001d019225_P001 Maize plasma membrane 18.17 24.07
Zm00001d017557_P001 Maize plastid 17.81 23.38
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 17.28 19.8
Zm00001d044387_P001 Maize nucleus 29.28 19.39
Protein Annotations
EnsemblPlants:Zm00001d048577_P001EnsemblPlants:Zm00001d048577_T001EnsemblPlantsGene:Zm00001d048577GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF240PFAM:PF01490ProteinID:AQL10414.1SEG:seg
TMHMM:TMhelixUniParc:UPI0008456791UniProt:A0A1D6PMX7MapMan:24.2.3.4.7::
Description
Transmembrane amino acid transporter family protein
Coordinates
chr9:+:159667998..159691026
Molecular Weight (calculated)
61900.0 Da
IEP (calculated)
7.617
GRAVY (calculated)
0.231
Length
567 amino acids
Sequence
(BLAST)
001: MRSSVSERSL IIESDDDDDD HPQSRSSAAA RSRRRHHQHE EDSAAGSDSD SGSSSSSCGT PRGPATDSSY TQQWPQSYRQ SIDILSSVQS PNLSFLGTPT
101: LSRLSNSFRG KTPEIISNLV KPLLRPTTSD DHHHHHQQQP EERKSSQYLL PSRKPSLQQI PEDQKPVPVA HEVSPYHKCT YTQAVVNGIN VLCGVGILST
201: PYAIKQGGWL GLVILCLFAI LAWYTGVLLR RCLDSKEGLE TYPDIGHAAF GATGRIAISI ILYVELYACC IEYLILEGDN LSKLFPNAHL SVGSLTMNSH
301: VLFTILTTII VMPTTWLRDL SCLSYLSAGG VFASILGVIC LFWVGVVDNV GFENKGTALN LPGIPIAIGL YGYCYSGHGV FPNIYSSLKK RNQFPSILFT
401: CIGLSTILFA GAAVMGYKMF GEATQSQFTL NLPENLVVSK IAVWTTVANP IITYALTITP LTMSLEELLP PNQQKYSNIV MLRSALVVST LLIALSVPFF
501: GLVMALVGSL LTMLVTYILP CACFLAILRR KVSWHQVAVC SFIIVVGVCC ACVGTYSSLS KIIQNYT
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.