Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78269 Canola plasma membrane 100.0 74.34
Solyc03g063030.2.1 Tomato plasma membrane 41.62 69.79
KRG99573 Soybean cytosol, nucleus, plasma membrane 18.53 68.22
Solyc03g063040.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 19.54 62.6
Zm00001d044994_P001 Maize cytosol, plasma membrane, vacuole 23.6 60.78
AT3G54830.1 Thale cress nucleus 81.47 58.79
Bra017088.1-P Field mustard cytosol, nucleus, plasma membrane 79.7 57.51
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 62.94 53.8
VIT_13s0019g04660.t01 Wine grape cytosol, nucleus, plasma membrane 76.14 53.29
Zm00001d043640_P001 Maize plasma membrane 22.84 53.25
KRG91942 Soybean plasma membrane 72.84 52.76
KRH34828 Soybean plasma membrane 71.57 50.27
Solyc11g008440.1.1 Tomato cytosol, nucleus, plasma membrane 70.3 49.91
GSMUA_Achr5P10650_001 Banana cytosol, nucleus, plasma membrane 68.02 48.38
GSMUA_Achr1P03170_001 Banana cytosol, nucleus, plasma membrane 67.77 47.42
Os04t0201800-00 Rice plasma membrane, plastid 48.22 47.26
PGSC0003DMT400036273 Potato cytosol, nucleus, plasma membrane 52.28 46.4
KRH38592 Soybean endoplasmic reticulum 27.92 46.03
TraesCS2B01G065200.1 Wheat cytosol, peroxisome, plasma membrane 64.21 45.42
TraesCS2A01G052500.1 Wheat plasma membrane 63.45 45.13
TraesCSU01G023100.1 Wheat cytosol, peroxisome, plasma membrane 63.71 45.06
Zm00001d004340_P002 Maize plasma membrane 64.72 44.74
HORVU2Hr1G008090.4 Barley cytosol, peroxisome, plasma membrane 63.71 44.66
PGSC0003DMT400019190 Potato cytosol, nucleus, plasma membrane 67.77 44.35
Os02t0101000-01 Rice cytosol, nucleus, plasma membrane 64.21 44.31
Zm00001d048577_P001 Maize cytosol, nucleus, plasma membrane 63.71 44.27
EES06091 Sorghum plasma membrane 63.96 43.75
TraesCS6B01G007400.1 Wheat cytosol, peroxisome, plasma membrane 61.17 42.81
TraesCS6A01G002400.1 Wheat cytosol, nucleus, plasma membrane 61.42 42.76
EER89806 Sorghum cytosol, nucleus, plasma membrane 61.93 42.73
TraesCS6D01G003200.1 Wheat cytosol, nucleus, plasma membrane 61.42 42.46
Bra005712.1-P Field mustard plasma membrane 53.55 42.03
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 55.33 41.29
Bra009608.1-P Field mustard plasma membrane 56.35 40.59
HORVU6Hr1G001480.1 Barley plasma membrane 61.17 40.57
KXG25873 Sorghum plasma membrane 64.97 38.91
Bra000217.1-P Field mustard plasma membrane 48.22 36.54
Zm00001d037057_P001 Maize cytosol, nucleus, plasma membrane 48.48 36.31
Bra004605.1-P Field mustard cytosol, nucleus, plasma membrane 48.48 36.11
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 48.48 35.77
Solyc03g063050.1.1 Tomato extracellular, plasma membrane 22.84 33.83
Bra025369.1-P Field mustard plasma membrane 34.77 33.83
Bra033075.1-P Field mustard plasma membrane 34.52 33.58
Bra023581.1-P Field mustard plasma membrane 24.37 30.48
Bra000591.1-P Field mustard plasma membrane 24.37 23.76
Bra034803.1-P Field mustard plasma membrane 24.37 22.48
Bra001425.1-P Field mustard plasma membrane 24.11 22.3
Bra033558.1-P Field mustard plasma membrane 20.05 22.07
Bra029326.1-P Field mustard peroxisome 23.86 21.96
Protein Annotations
EnsemblPlants:Bra007103.1EnsemblPlants:Bra007103.1-PEnsemblPlantsGene:Bra007103GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF240PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002542998UniProt:M4CSB1MapMan:24.2.3.4.7:::
Description
AT2G39130 (E=1e-179) | amino acid transporter family protein
Coordinates
chrA09:-:27331687..27335678
Molecular Weight (calculated)
42022.3 Da
IEP (calculated)
6.375
GRAVY (calculated)
0.910
Length
394 amino acids
Sequence
(BLAST)
001: MGISNDSSFG QAVLNGVNVL CGVGILSTPY AVKEGGWLGL LILFAFGVLC FYTGLLLRYC LDSHPDLQTY PDIGHAAFGT TGRILVSVIL YLELYAMSVE
101: YIILESDNLS SLFPNAALSI GGFHLDAPHL FALLTTIAVL PTVWLRDLSI LSYISAGGVI ASVLVVLCLF WVGLIDEVGI HSKGTPLNLA TLPVSVGLYG
201: YCYSGHGVFP NIYTSMAKPS QFPAVLVTCF GICTLMYAGV AVMGYSMFGE STESQFTLNL PQDLVASKIA LWTTVKITYA LTLSPVAMSL EELLPSNHGK
301: SRFYAIAIRS ALAFSTLLVG LAIPFFGLVM SLIGSFLTML ITLILPPACF LSILRTKVTP TQVALCIVII TVGAVCSAMG TYSALSKIIE KLST
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.