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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35425 Canola plasma membrane 100.0 100.0
CDY22507 Canola plasma membrane 98.46 98.46
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 93.85 91.39
AT2G41190.1 Thale cress cytosol, peroxisome, plasma membrane 90.19 87.5
Bra004605.1-P Field mustard cytosol, nucleus, plasma membrane 88.27 86.77
PGSC0003DMT400080507 Potato peroxisome 64.23 63.86
Solyc03g078150.2.1 Tomato peroxisome 63.65 63.05
VIT_08s0007g05210.t01 Wine grape plasma membrane 60.58 60.93
TraesCS6A01G348300.2 Wheat cytosol, plasma membrane, vacuole 54.62 59.54
KRH16006 Soybean cytosol 38.65 58.94
TraesCS6A01G348400.1 Wheat cytosol, peroxisome, plasma membrane 58.85 57.84
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 59.81 57.59
TraesCS6D01G331300.1 Wheat plasma membrane 56.54 57.09
TraesCS6B01G382000.2 Wheat cytosol, peroxisome, plasma membrane 58.65 56.69
TraesCS6D01G331400.2 Wheat cytosol, peroxisome, plasma membrane 58.46 56.61
EES07657 Sorghum plasma membrane 55.77 55.56
Zm00001d018336_P002 Maize plasma membrane 58.27 55.39
Zm00001d052063_P003 Maize plasma membrane 57.5 55.37
EES07655 Sorghum plasma membrane 58.27 54.99
TraesCS6B01G381900.1 Wheat plasma membrane 53.65 54.6
KRG95106 Soybean cytosol, peroxisome, plasma membrane 47.5 53.7
Zm00001d018340_P001 Maize cytosol, peroxisome, plasma membrane 54.23 53.41
KRH77523 Soybean cytosol, nucleus, plasma membrane 48.08 52.85
HORVU6Hr1G083720.2 Barley plastid 58.27 52.06
KRH66774 Soybean plasma membrane 25.38 49.44
Os02t0788800-01 Rice cytosol, peroxisome, plasma membrane 30.0 48.3
Bra007103.1-P Field mustard plasma membrane 36.54 48.22
Bra033075.1-P Field mustard plasma membrane 31.92 40.99
Bra009608.1-P Field mustard plasma membrane 42.88 40.77
Bra017088.1-P Field mustard cytosol, nucleus, plasma membrane 42.69 40.66
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 40.77 40.15
Bra025369.1-P Field mustard plasma membrane 30.96 39.75
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 35.19 39.7
Bra005712.1-P Field mustard plasma membrane 38.08 39.44
Bra023581.1-P Field mustard plasma membrane 16.35 26.98
Bra000591.1-P Field mustard plasma membrane 19.62 25.25
Bra001425.1-P Field mustard plasma membrane 18.85 23.0
Bra034803.1-P Field mustard plasma membrane 18.46 22.48
Bra029326.1-P Field mustard peroxisome 18.27 22.2
Bra033558.1-P Field mustard plasma membrane 14.81 21.51
Protein Annotations
EnsemblPlants:Bra000217.1EnsemblPlants:Bra000217.1-PEnsemblPlantsGene:Bra000217GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF358PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002540340UniProt:M4C7N9MapMan:24.2.3.4.7:::
Description
AT2G41190 (E=2e-248) | amino acid transporter family protein
Coordinates
chrA03:-:9942399..9945269
Molecular Weight (calculated)
56846.1 Da
IEP (calculated)
4.588
GRAVY (calculated)
0.398
Length
520 amino acids
Sequence
(BLAST)
001: MEVKKPEFTL EDDEDLEDSS KYENDSDTDQ SDVGDLPGDD DNNDDTFISQ VQWPQSFRET TDSYTIAASP IFGSLRSNPS FYRQSRSNLD VESKAPLLPE
101: RNEESDKASV TQSVWSHKGS FAEELPIGGY GCSVTQTIFN GINVMAGVGL LSTPYTVKEA GWASMVILLM FAVICCYTAT LMKDCFENKP GIITYPDIGE
201: AAFGKYGRIL ICVLLYTELY SYCVEFIILE GDNLTGLFPG TSIDWLGIKI DSIHLFGIIT ALIILPTVWL KDLSIISYLS AGGVIATVLI AVSTFFLGTT
301: GGIGFNHTGH AVKWNGIPFA IGIYGFCYSG HSVFPNIYQS MADKTKFNKA VITCFILCVL IYGGVAIMGY LMFGEATLSQ ITLNMPKGSL FSKVAQWTTV
401: VSPFTKYALL MNPLARGIEE LLPERISENI WCFLLLRTAL VASSVCSAFL IPFFGLVMAL IGSLLSILVA IIMPALCFMR IMGNKATRTQ MILSSTIVAI
501: GLVSGILGTY SSVAKIIRNY
Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)
001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ
Arabidopsis Description
AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.