CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000217.1-P	Field mustard	plasma membrane	98.46	98.46
CDY35425	Canola	plasma membrane	98.46	98.46
CDY06942	Canola	cytosol, peroxisome, plasma membrane	92.69	90.26
CDY67831	Canola	cytosol, peroxisome, plasma membrane	91.92	89.68
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	89.62	86.94
CDY23868	Canola	cytosol, nucleus, plasma membrane	87.69	86.2
CDX79951	Canola	cytosol, nucleus, plasma membrane	87.31	85.82
PGSC0003DMT400080507	Potato	peroxisome	63.85	63.48
Solyc03g078150.2.1	Tomato	peroxisome	63.46	62.86
VIT_08s0007g05210.t01	Wine grape	plasma membrane	60.38	60.73
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	54.23	59.12
KRH16006	Soybean	cytosol	38.27	58.36
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	58.46	57.47
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	59.62	57.41
TraesCS6D01G331300.1	Wheat	plasma membrane	56.15	56.7
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	58.27	56.32
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	57.88	56.05
Zm00001d052063_P003	Maize	plasma membrane	57.31	55.19
Zm00001d018336_P002	Maize	plasma membrane	57.88	55.03
EES07657	Sorghum	plasma membrane	55.19	54.98
EES07655	Sorghum	plasma membrane	58.08	54.81
TraesCS6B01G381900.1	Wheat	plasma membrane	53.27	54.21
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	47.12	53.26
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	54.04	53.22
KRH77523	Soybean	cytosol, nucleus, plasma membrane	47.88	52.64
HORVU6Hr1G083720.2	Barley	plastid	58.08	51.89
KRH66774	Soybean	plasma membrane	25.38	49.44
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	29.81	47.99
CDY18351	Canola	plastid	41.92	42.83
CDY55126	Canola	plasma membrane	41.54	42.02
CDX78269	Canola	plasma membrane	42.31	41.51
CDX73443	Canola	cytosol, nucleus, plasma membrane	42.69	41.34
CDY40336	Canola	plasma membrane	43.46	41.32
CDY10463	Canola	plasma membrane	43.08	41.03
CDY44630	Canola	plasma membrane	43.27	40.98
CDX73974	Canola	cytosol, nucleus, plasma membrane	32.12	40.83
CDX74865	Canola	plasma membrane	43.27	40.76
CDY44419	Canola	plasma membrane	31.73	40.74
CDX93284	Canola	cytosol, nucleus, plasma membrane	42.69	40.66
CDY07919	Canola	cytosol, nucleus, plasma membrane	40.96	40.34
CDX91000	Canola	plasma membrane	32.69	39.53
CDX86397	Canola	plasma membrane	30.77	39.51
CDX85233	Canola	plasma membrane	30.77	39.51
CDX85556	Canola	plasma membrane	32.31	39.16
CDX80808	Canola	plasma membrane	18.46	37.94
CDX73972	Canola	extracellular, plastid	9.04	35.88
CDX80809	Canola	plasma membrane	40.38	35.41
CDY55127	Canola	cytosol, plasma membrane, plastid	39.62	35.27
CDY38090	Canola	plasma membrane	24.81	29.79
CDY04048	Canola	plasma membrane	31.73	28.45
CDY70145	Canola	plasma membrane	20.0	25.81
CDY21456	Canola	plasma membrane	20.0	25.81
CDY01068	Canola	plasma membrane	19.04	23.63
CDY59097	Canola	plastid	20.0	23.48
CDY08487	Canola	plasma membrane	18.65	23.26
CDY54797	Canola	plastid	19.81	23.15
CDY53922	Canola	plasma membrane	18.85	23.0
CDX73848	Canola	plasma membrane	18.85	23.0
CDX85489	Canola	vacuole	18.65	22.45
CDY42861	Canola	peroxisome	18.27	22.2
CDY47026	Canola	peroxisome, plastid	18.27	22.04

Protein Annotations

EnsemblPlants:CDY22507	EnsemblPlantsGene:GSBRNA2T00019080001	GO:A0A078GBR9	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF358	PFAM:PF01490	ProteinID:CDY22507	ProteinID:CDY22507.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE396C	UniProt:A0A078GBR9	MapMan:24.2.3.4.7	:

Description

BnaC03g23170DBnaC03g23170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBR9]

Coordinates

chrLK032132:-:254789..258234

Molecular Weight (calculated)

56886.0 Da

IEP (calculated)

4.536

GRAVY (calculated)

0.389

Length

520 amino acids

Sequence
(BLAST)

001: MEVKKPEFTF EDDEDLEDSS KYENDSDTDQ SDVGDLPGDD DNNDDTFISQ VQWPQSFRET TDSYTIAASP IFGSLRSNPS FYRQSRSNLD VESKAPLLPE
101: RNEESDKTSV TQSVWSHKGS FAEEFPIGGY GCSVTQTIFN GINVMAGVGL LSTPYTVKEA GWASMVILLM FAVICCYTAT LMKDCFENKP GIITYPDIGE
201: AAFGKYGRIL ICVLLYTELY SYCVEFIILE GDNLTGLFPG TSIDWLGIKI DSIHLFGIIT ALIILPTVWL KDLSIISYLS AGGVIATVLI AVSSFFLGTT
301: GGIGFNHTGY AVKWNGIPFA IGIYGFCYSG HSVFPNIYQS MADKSKFNKA VITCFILCVL IYGGVAIMGY LMFGEATSSQ ITLNMPKGSL FSKVAQWTTV
401: VSPFTKYALL MNPLARGIEE LLPERISENI WCFLLLRTAL VASSVCSAFL IPFFGLVMAL IGSLLSILVA IIMPALCFMR IMGNKATRTQ MILSSAIVAI
501: GLVSGILGTY SSVAKIIRNY

Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.