Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 3
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023581.1-P | Field mustard | plasma membrane | 72.92 | 100.0 |
| CDY38090 | Canola | plasma membrane | 76.62 | 76.44 |
| AT5G16740.1 | Thale cress | plasma membrane | 66.9 | 67.84 |
| HORVU4Hr1G012350.1 | Barley | endoplasmic reticulum, plasma membrane | 42.13 | 45.5 |
| VIT_05s0062g01150.t01 | Wine grape | plasma membrane | 44.91 | 44.7 |
| PGSC0003DMT400055694 | Potato | extracellular, plasma membrane | 37.5 | 43.9 |
| KRG97383 | Soybean | mitochondrion | 46.99 | 43.01 |
| Solyc09g098380.1.1 | Tomato | plasma membrane | 43.75 | 42.76 |
| TraesCS4A01G240700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 44.44 | 42.48 |
| GSMUA_Achr6P06880_001 | Banana | mitochondrion, plasma membrane, plastid | 45.14 | 41.23 |
| Zm00001d004633_P001 | Maize | plasma membrane | 44.21 | 41.16 |
| TraesCS4D01G072600.1 | Wheat | mitochondrion, plasma membrane | 44.44 | 41.11 |
| KRH31531 | Soybean | mitochondrion | 42.82 | 40.93 |
| KRH58803 | Soybean | mitochondrion | 42.82 | 40.22 |
| TraesCS4B01G074300.1 | Wheat | plasma membrane | 43.52 | 39.75 |
| Os11t0298000-00 | Rice | mitochondrion, plastid | 43.98 | 39.34 |
| CDX80808 | Canola | plasma membrane | 14.35 | 24.51 |
| CDX86397 | Canola | plasma membrane | 22.92 | 24.44 |
| CDX85233 | Canola | plasma membrane | 22.92 | 24.44 |
| CDY44419 | Canola | plasma membrane | 21.99 | 23.46 |
| CDX91000 | Canola | plasma membrane | 22.69 | 22.79 |
| CDY07919 | Canola | cytosol, nucleus, plasma membrane | 27.08 | 22.16 |
| CDX85556 | Canola | plasma membrane | 21.99 | 22.14 |
| CDX73974 | Canola | cytosol, nucleus, plasma membrane | 20.83 | 22.0 |
| CDY55126 | Canola | plasma membrane | 26.16 | 21.98 |
| CDX73972 | Canola | extracellular, plastid | 6.48 | 21.37 |
| CDX78269 | Canola | plasma membrane | 25.93 | 21.13 |
| CDX73443 | Canola | cytosol, nucleus, plasma membrane | 25.93 | 20.86 |
| CDY55127 | Canola | cytosol, plasma membrane, plastid | 26.85 | 19.86 |
| CDY18351 | Canola | plastid | 22.92 | 19.45 |
| CDY10463 | Canola | plasma membrane | 23.61 | 18.68 |
| CDY22507 | Canola | plasma membrane | 22.45 | 18.65 |
| CDY40336 | Canola | plasma membrane | 23.61 | 18.65 |
| CDX80809 | Canola | plasma membrane | 25.46 | 18.55 |
| CDY35425 | Canola | plasma membrane | 22.22 | 18.46 |
| CDX93284 | Canola | cytosol, nucleus, plasma membrane | 22.92 | 18.13 |
| CDY44630 | Canola | plasma membrane | 22.92 | 18.03 |
| CDY70145 | Canola | plasma membrane | 16.67 | 17.87 |
| CDY06942 | Canola | cytosol, peroxisome, plasma membrane | 21.99 | 17.79 |
| CDX74865 | Canola | plasma membrane | 22.69 | 17.75 |
| CDY67831 | Canola | cytosol, peroxisome, plasma membrane | 21.76 | 17.64 |
| CDY21456 | Canola | plasma membrane | 16.44 | 17.62 |
| CDX73848 | Canola | plasma membrane | 17.36 | 17.61 |
| CDY53922 | Canola | plasma membrane | 17.36 | 17.61 |
| CDY23868 | Canola | cytosol, nucleus, plasma membrane | 21.53 | 17.58 |
| CDX79951 | Canola | cytosol, nucleus, plasma membrane | 21.3 | 17.39 |
| CDY59097 | Canola | plastid | 17.82 | 17.38 |
| CDY54797 | Canola | plastid | 17.82 | 17.3 |
| CDY08487 | Canola | plasma membrane | 16.67 | 17.27 |
| CDY01068 | Canola | plasma membrane | 16.67 | 17.18 |
| CDY04048 | Canola | plasma membrane | 22.22 | 16.55 |
| CDY42861 | Canola | peroxisome | 15.28 | 15.42 |
| CDY47026 | Canola | peroxisome, plastid | 15.28 | 15.31 |
Protein Annotations
| EnsemblPlants:CDX85489 | EnsemblPlantsGene:GSBRNA2T00143190001 | GO:A0A078DB24 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF219 |
| PFAM:PF01490 | ProteinID:CDX85489 | ProteinID:CDX85489.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE5903 |
| MapMan:24.2.3.4.7 | : | : | : | : | : |
Description
BnaA02g03240D
Coordinates
chrLK031842:+:336934..340803
Molecular Weight (calculated)
48447.9 Da
IEP (calculated)
9.906
GRAVY (calculated)
0.450
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGTKVCIAC VEENKVCECH HENPVKELGL SHEASENSSF LHSVINMVGM LIGLGQLSMP YAVESGGWIS IFLLISLGVL TTYTSHILGN CLRRNPKSKS
101: YSDIGYSAFG LHGRLLASLF IYLEIFMALV SYTISLHDNI AAAFPATFTN LHNGSFPAAK LTAVAVAIAL PSLWIRNLSS ISYLSSGGIF MSAVIFMSVV
201: YTAVFGGVID DGRIPVLRLG NIPTVSGVYL FGFGGHIVFP NLYTSMKDPS KFTKITGSIL DFATLNVQKM NLVNRKFADP RFKYYYRLKY MNYYYLHFFM
301: EYCLHVKIIR VFLTSFLRIK MKNPLQAYSF TLRRKMYQRP RVVLNYRFYF ILTGIPPNFQ FLSFSIAPRF LSVTISVILP CAFYVKICWD GMSKFTRAAN
401: VVFVVFGCVL GVLGSFDSSK LLVNKLVRVH GN
101: YSDIGYSAFG LHGRLLASLF IYLEIFMALV SYTISLHDNI AAAFPATFTN LHNGSFPAAK LTAVAVAIAL PSLWIRNLSS ISYLSSGGIF MSAVIFMSVV
201: YTAVFGGVID DGRIPVLRLG NIPTVSGVYL FGFGGHIVFP NLYTSMKDPS KFTKITGSIL DFATLNVQKM NLVNRKFADP RFKYYYRLKY MNYYYLHFFM
301: EYCLHVKIIR VFLTSFLRIK MKNPLQAYSF TLRRKMYQRP RVVLNYRFYF ILTGIPPNFQ FLSFSIAPRF LSVTISVILP CAFYVKICWD GMSKFTRAAN
401: VVFVVFGCVL GVLGSFDSSK LLVNKLVRVH GN
001: MVCVACVEEN KGCECEHEKP VRELVLEAAS ENSSFLHSVI NMVGMLIGLG QLSMPYAVES GGWMSIFLLI SFGILTTYTS HILGKCIRRN PKSKSYSDIG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG
Arabidopsis Description
AVT1HAmino acid transporter AVT1H [Source:UniProtKB/Swiss-Prot;Acc:Q9LFE3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.