CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
golgi 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0062g01150.t01	Wine grape	plasma membrane	64.35	68.2
PGSC0003DMT400055694	Potato	extracellular, plasma membrane	53.91	67.21
KRG97383	Soybean	mitochondrion	67.83	66.1
KRH31531	Soybean	mitochondrion	61.74	62.83
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	64.35	62.58
Solyc09g098380.1.1	Tomato	plasma membrane	59.57	61.99
HORVU4Hr1G012350.1	Barley	endoplasmic reticulum, plasma membrane	52.17	60.0
AT5G16740.1	Thale cress	plasma membrane	53.48	57.75
CDY38090	Canola	plasma membrane	54.35	57.74
TraesCS4A01G240700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	55.65	56.64
Zm00001d004633_P001	Maize	plasma membrane	56.3	55.82
TraesCS4D01G072600.1	Wheat	mitochondrion, plasma membrane	56.09	55.25
Os11t0298000-00	Rice	mitochondrion, plastid	56.52	53.83
TraesCS4B01G074300.1	Wheat	plasma membrane	55.22	53.7
Bra023581.1-P	Field mustard	plasma membrane	35.87	52.38
CDX85489	Canola	vacuole	40.22	42.82
KRH40411	Soybean	plasma membrane	18.91	32.34
KRH30199	Soybean	extracellular, plasma membrane	25.87	31.9
KRG89633	Soybean	plasma membrane	26.74	30.22
KRH40095	Soybean	plasma membrane	27.39	29.58
KRG98240	Soybean	plasma membrane	27.61	29.06
KRG99573	Soybean	cytosol, nucleus, plasma membrane	6.74	28.97
KRH30194	Soybean	plasma membrane	27.17	28.6
KRH38592	Soybean	endoplasmic reticulum	14.78	28.45
KRH16006	Soybean	cytosol	21.09	28.45
KRH40094	Soybean	plasma membrane	26.3	28.34
KRH01177	Soybean	plasma membrane	26.09	27.97
KRH27948	Soybean	plasma membrane	10.43	27.75
KRG91942	Soybean	plasma membrane	32.39	27.39
KRH34828	Soybean	plasma membrane	32.61	26.74
KRG98784	Soybean	plasma membrane	21.3	26.63
KRH33248	Soybean	cytosol, nucleus, plasma membrane	29.35	24.91
KRH71649	Soybean	cytosol, nucleus, plasma membrane	29.35	24.91
KRH33027	Soybean	plasma membrane	30.87	24.36
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	23.48	24.22
KRG99991	Soybean	cytosol, nucleus, peroxisome	14.78	23.86
KRH77523	Soybean	cytosol, nucleus, plasma membrane	23.91	23.26
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	22.83	22.83
KRH66774	Soybean	plasma membrane	12.61	21.72
KRH75803	Soybean	mitochondrion	14.13	20.77
KRH68062	Soybean	plasma membrane	16.74	18.33
KRG96325	Soybean	plasma membrane	16.74	18.25
KRH39423	Soybean	plasma membrane	16.3	17.52
KRH28932	Soybean	cytosol, plasma membrane	10.87	13.89

Protein Annotations

EMBL:ACUP02003292	EnsemblPlants:KRH58803	EnsemblPlantsGene:GLYMA_05G149000	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF219	PFAM:PF01490	ProteinID:KRH58803	ProteinID:KRH58803.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002957AB3	UniProt:I1K3P2	MapMan:24.2.3.4.7	:

Description

hypothetical protein

Coordinates

chr5:+:34336246..34338808

Molecular Weight (calculated)

50277.6 Da

IEP (calculated)

9.024

GRAVY (calculated)

0.552

Length

460 amino acids

Sequence
(BLAST)

001: MLKSLRKSLS LQQKCLQHKN QVDNAESVHG ANLANCIFCV EETKQCKCDH NNIEDTKSAE GGTNLDAEHD SEANCSFTHA VINMVGMLIE QGGWTSAFLL
101: IGLGVICAYS SHLLGKCLEK NTKLRSYVDI GGHAFGAKGR IMATTFIYME IFMALVSYTI SLHDNLNSIF SGMHLKLQLA KLSTLQLLTI GAVLIALPSL
201: WLRDLSSISF LLTGGILMSL VIFVSIASTP IFGGVQINHK IPLLHLHSIP SISGLYIFSY GGHIVFPNLY KAMKDPSKFT KVSIVSFTLV TLLYTTLGFM
301: GGKMFGPDVN SQVTLSMPPK LFVTKIALWA TVVTPMTKYA LEFAPFAIQL EKRLPKFNSG RTKMIIRSSV GSFLLLVILA LALSVPYFEH VLCLTGSLVS
401: VAICLIFPCA FYIKICWGQI SKPLFVLNLS IITCGFLLGV MGTISSSNLL VKHFLQAQSA

Best Arabidopsis Sequence Match ( AT5G16740.1 )
(BLAST)

001: MVCVACVEEN KGCECEHEKP VRELVLEAAS ENSSFLHSVI NMVGMLIGLG QLSMPYAVES GGWMSIFLLI SFGILTTYTS HILGKCIRRN PKSKSYSDIG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG

Arabidopsis Description

AVT1HAmino acid transporter AVT1H [Source:UniProtKB/Swiss-Prot;Acc:Q9LFE3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.