CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97383	Soybean	mitochondrion	91.37	87.5
VIT_05s0062g01150.t01	Wine grape	plasma membrane	60.18	62.67
KRH58803	Soybean	mitochondrion	62.83	61.74
PGSC0003DMT400055694	Potato	extracellular, plasma membrane	48.23	59.08
Solyc09g098380.1.1	Tomato	plasma membrane	55.97	57.24
HORVU4Hr1G012350.1	Barley	endoplasmic reticulum, plasma membrane	50.0	56.5
CDY38090	Canola	plasma membrane	53.98	56.35
AT5G16740.1	Thale cress	plasma membrane	52.65	55.87
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	56.86	54.33
TraesCS4A01G240700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	51.77	51.77
Bra023581.1-P	Field mustard	plasma membrane	35.84	51.43
Zm00001d004633_P001	Maize	plasma membrane	52.43	51.08
TraesCS4D01G072600.1	Wheat	mitochondrion, plasma membrane	52.21	50.54
Os11t0298000-00	Rice	mitochondrion, plastid	52.88	49.48
TraesCS4B01G074300.1	Wheat	plasma membrane	51.11	48.84
CDX85489	Canola	vacuole	40.93	42.82
KRG99573	Soybean	cytosol, nucleus, plasma membrane	7.74	32.71
KRH30199	Soybean	extracellular, plasma membrane	24.56	29.76
KRH38592	Soybean	endoplasmic reticulum	15.49	29.29
KRH16006	Soybean	cytosol	20.8	27.57
KRG98240	Soybean	plasma membrane	26.33	27.23
KRH30194	Soybean	plasma membrane	26.11	27.0
KRG89633	Soybean	plasma membrane	24.11	26.78
KRH40411	Soybean	plasma membrane	15.49	26.02
KRH40095	Soybean	plasma membrane	24.34	25.82
KRH01177	Soybean	plasma membrane	24.34	25.64
KRH40094	Soybean	plasma membrane	24.11	25.53
KRG91942	Soybean	plasma membrane	30.53	25.37
KRH34828	Soybean	plasma membrane	30.97	24.96
KRH33248	Soybean	cytosol, nucleus, plasma membrane	29.65	24.72
KRH71649	Soybean	cytosol, nucleus, plasma membrane	28.76	23.99
KRH27948	Soybean	plasma membrane	9.07	23.7
KRG98784	Soybean	plasma membrane	18.36	22.55
KRH33027	Soybean	plasma membrane	28.1	21.78
KRG99991	Soybean	cytosol, nucleus, peroxisome	13.5	21.4
KRH77523	Soybean	cytosol, nucleus, plasma membrane	22.12	21.14
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	20.58	20.85
KRH66774	Soybean	plasma membrane	11.95	20.22
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	20.58	20.22
KRH75803	Soybean	mitochondrion	12.83	18.53
KRH39423	Soybean	plasma membrane	16.59	17.52
KRG96325	Soybean	plasma membrane	15.71	16.82
KRH68062	Soybean	plasma membrane	15.49	16.67
KRH28932	Soybean	cytosol, plasma membrane	10.62	13.33

Protein Annotations

EntrezGene:100786839	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	EMBL:ACUP02007146	EnsemblPlantsGene:GLYMA_11G252400	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	UniProt:K7LRY6	EnsemblPlants:KRH31531	ProteinID:KRH31531	ProteinID:KRH31531.1
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF219	TMHMM:TMhelix	UniParc:UPI000295A313	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:34350993..34354500

Molecular Weight (calculated)

49280.0 Da

IEP (calculated)

9.247

GRAVY (calculated)

0.515

Length

452 amino acids

Sequence
(BLAST)

001: MWGKILQSIR KSLISLQQKS MNSRKSEEVD SSVTSVSVSL HDGVQWVNCN CCIEENKQCN FDHINASEGA NNVHAQRDAN ANSSFTHAVI NMVGMLVGLG
101: QLSTPYAVEN GGWSSAFLLM GLGVMCAYSS HILGVCLRKN PKLTSFMDIG KHAFGSKVFL GTNLKLHLPN FSSSQLLTAV AVFIAMPSLW IRDLSSISFL
201: SSVGILMSLL IFLCVAATAL LGHVQSNHSI PVLHLHNIPS VSGLYVFGYG GHIVFPELYT AMKDPSKFTK VSIVSFAVVT AIYTTLGFMG AKMFGKDVKS
301: QITLSMPQEH IVTKIALWAT VVAPMTKYAL EFTPFAIQLE HALPTSMSVR TKMIIRGCVG SFSLLFILTL ALSVPYFEHV LSLTGSLVSV AVCLILPSAF
401: YVKICWGQIS KPHLLLNLFL IIFGFVLAVM GTISSSQLLL KSLQSHNLRH KE

Best Arabidopsis Sequence Match ( AT5G16740.1 )
(BLAST)

001: MVCVACVEEN KGCECEHEKP VRELVLEAAS ENSSFLHSVI NMVGMLIGLG QLSMPYAVES GGWMSIFLLI SFGILTTYTS HILGKCIRRN PKSKSYSDIG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG

Arabidopsis Description

AVT1HAmino acid transporter AVT1H [Source:UniProtKB/Swiss-Prot;Acc:Q9LFE3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.