Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g098380.1.1 | Tomato | plasma membrane | 94.58 | 78.96 |
| VIT_05s0062g01150.t01 | Wine grape | plasma membrane | 71.82 | 61.06 |
| HORVU4Hr1G012350.1 | Barley | endoplasmic reticulum, plasma membrane | 61.52 | 56.75 |
| KRH58803 | Soybean | mitochondrion | 67.21 | 53.91 |
| GSMUA_Achr6P06880_001 | Banana | mitochondrion, plasma membrane, plastid | 67.48 | 52.64 |
| AT5G16740.1 | Thale cress | plasma membrane | 59.62 | 51.64 |
| TraesCS4A01G240700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 61.52 | 50.22 |
| KRG97383 | Soybean | mitochondrion | 64.23 | 50.21 |
| CDY38090 | Canola | plasma membrane | 58.54 | 49.88 |
| KRH31531 | Soybean | mitochondrion | 59.08 | 48.23 |
| TraesCS4D01G072600.1 | Wheat | mitochondrion, plasma membrane | 60.7 | 47.97 |
| Zm00001d004633_P001 | Maize | plasma membrane | 59.89 | 47.63 |
| TraesCS4B01G074300.1 | Wheat | plasma membrane | 59.35 | 46.3 |
| Os11t0298000-00 | Rice | mitochondrion, plastid | 59.08 | 45.13 |
| Bra023581.1-P | Field mustard | plasma membrane | 37.94 | 44.44 |
| CDX85489 | Canola | vacuole | 43.9 | 37.5 |
| PGSC0003DMT400019843 | Potato | peroxisome, plasma membrane, plastid, vacuole | 14.36 | 35.33 |
| PGSC0003DMT400076795 | Potato | plasma membrane | 28.73 | 31.55 |
| PGSC0003DMT400082135 | Potato | plasma membrane | 7.86 | 28.43 |
| PGSC0003DMT400076791 | Potato | plasma membrane | 30.89 | 27.14 |
| PGSC0003DMT400008751 | Potato | plasma membrane | 31.17 | 27.0 |
| PGSC0003DMT400028760 | Potato | cytosol, peroxisome, plasma membrane | 33.88 | 23.63 |
| PGSC0003DMT400080507 | Potato | peroxisome | 32.25 | 22.75 |
| PGSC0003DMT400036273 | Potato | cytosol, nucleus, plasma membrane | 25.75 | 21.4 |
| PGSC0003DMT400019190 | Potato | cytosol, nucleus, plasma membrane | 30.89 | 18.94 |
| PGSC0003DMT400094217 | Potato | plasma membrane | 21.14 | 18.48 |
| PGSC0003DMT400045065 | Potato | plasma membrane, plastid | 20.87 | 18.29 |
| PGSC0003DMT400033422 | Potato | plasma membrane | 21.14 | 18.06 |
| PGSC0003DMT400086252 | Potato | plasma membrane | 20.05 | 17.41 |
| PGSC0003DMT400048045 | Potato | plasma membrane | 19.24 | 16.63 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400055694 | EnsemblPlantsGene:PGSC0003DMG400021623 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF219 | PFAM:PF01490 | PGSC:PGSC0003DMG400021623 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000296E4BF | UniProt:M1BYC3 | MapMan:24.2.3.4.7 | : | : | : |
Description
Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400021623]
Coordinates
chr9:+:61205870..61207293
Molecular Weight (calculated)
40357.9 Da
IEP (calculated)
10.023
GRAVY (calculated)
0.820
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIILIGLG IICAYTSHLL GKCLQKNPKS KDYKDIGHQA FGTKGRIIVT SFIYLEIFMA LISYTISLHD NLSIVFINTN FKLKGILFHL STSQILTTIA
101: ILIAIPSLWL RNFSSISFLS SGGIFMSLLI FVTVACTAIF GGIKANHQIP FLHLQNIPSI SGLYIFSYAG HIVFPNIYTA MKDPSKFTKV SIVSFSLVTT
201: LYISLGFMGA KLFGPQVSSQ ITLSMPHDQI ITKFALWATI LTPMTKYALE FAPIAIELEE NLPSSMKSKV KMMIRGIVGS ILLLVILILA LSVPYFEHVL
301: SLTGSLVGVG ICVIFPCAFY TKIFWGEISR MSLILNVVLI VIGGLLGVVG TISSSKLLAK SLKRAHDST
101: ILIAIPSLWL RNFSSISFLS SGGIFMSLLI FVTVACTAIF GGIKANHQIP FLHLQNIPSI SGLYIFSYAG HIVFPNIYTA MKDPSKFTKV SIVSFSLVTT
201: LYISLGFMGA KLFGPQVSSQ ITLSMPHDQI ITKFALWATI LTPMTKYALE FAPIAIELEE NLPSSMKSKV KMMIRGIVGS ILLLVILILA LSVPYFEHVL
301: SLTGSLVGVG ICVIFPCAFY TKIFWGEISR MSLILNVVLI VIGGLLGVVG TISSSKLLAK SLKRAHDST
001: MVCVACVEEN KGCECEHEKP VRELVLEAAS ENSSFLHSVI NMVGMLIGLG QLSMPYAVES GGWMSIFLLI SFGILTTYTS HILGKCIRRN PKSKSYSDIG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG
Arabidopsis Description
AVT1HAmino acid transporter AVT1H [Source:UniProtKB/Swiss-Prot;Acc:Q9LFE3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.