Factsheet for Zm00001d004633_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plasma membrane, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G012350.1	Barley	endoplasmic reticulum, plasma membrane	67.67	78.5
Os11t0298000-00	Rice	mitochondrion, plastid	78.45	75.36
TraesCS4D01G072600.1	Wheat	mitochondrion, plasma membrane	74.14	73.66
TraesCS4A01G240700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	71.34	73.23
TraesCS4B01G074300.1	Wheat	plasma membrane	70.47	69.13
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	69.61	68.29
VIT_05s0062g01150.t01	Wine grape	plasma membrane	59.91	64.06
PGSC0003DMT400055694	Potato	extracellular, plasma membrane	47.63	59.89
AT5G16740.1	Thale cress	plasma membrane	54.09	58.92
Solyc09g098380.1.1	Tomato	plasma membrane	55.6	58.37
CDY38090	Canola	plasma membrane	53.88	57.74
KRH58803	Soybean	mitochondrion	55.82	56.3
KRG97383	Soybean	mitochondrion	56.03	55.08
Bra023581.1-P	Field mustard	plasma membrane	36.85	54.29
KRH31531	Soybean	mitochondrion	51.08	52.43
CDX85489	Canola	vacuole	41.16	44.21
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	10.99	33.33
Zm00001d043640_P001	Maize	plasma membrane	11.64	31.95
Zm00001d037229_P001	Maize	plasma membrane	27.37	31.83
Zm00001d003422_P001	Maize	cytosol, plasma membrane, vacuole	30.82	31.22
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	16.38	28.15
Zm00001d004340_P002	Maize	plasma membrane	34.05	27.72
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	31.03	27.27
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	31.47	25.75
Zm00001d052063_P003	Maize	plasma membrane	29.74	25.56
Zm00001d018336_P002	Maize	plasma membrane	29.96	25.41
Zm00001d041534_P002	Maize	plasma membrane	31.03	23.65
Zm00001d030751_P001	Maize	plasma membrane	31.47	23.1
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	8.84	22.78
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	25.43	22.43
Zm00001d019225_P001	Maize	plasma membrane	19.83	21.5
Zm00001d017557_P001	Maize	plastid	18.1	19.44
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	18.97	17.78
Zm00001d044387_P001	Maize	nucleus	29.53	16.0

Protein Annotations

EMBL:BT036233	EnsemblPlants:Zm00001d004633_P001	EnsemblPlants:Zm00001d004633_T001	EnsemblPlantsGene:Zm00001d004633	EntrezGene:100193857	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF219	PFAM:PF01490
ProteinID:ONM19304.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00017B6E2F	UniProt:B4FGJ5	MapMan:24.2.3.4.7

Description

Transmembrane amino acid transporter family protein

Coordinates

chr2:+:124216656..124218788

Molecular Weight (calculated)

49542.3 Da

IEP (calculated)

8.717

GRAVY (calculated)

0.730

Length

464 amino acids

Sequence
(BLAST)

001: MASPRCWSVV CPKPRQVASE SVHGAQLALQ RLSRRCETCD VEASTPCSCR KEAVARDTEE DSSGPNSSFA HSVINMVGML IGLGQLSTPY ALENGGWASV
101: FLLIGLGVMC AYTAHIIGRC LDEDSAGSKT YQDIGKRAFG VKGRVIASTF TYLEIFLALV SYTISLSDNL PLVFAGVHLH LPWLHLSATQ LLTIIAVLLA
201: LPSLWLRDLS SISFLSFAGI IMSLLIFGSV VCAAAFGRVS LGKHIPVLQL EKIPAVSGLY MFSYAGHIVF PNIYAAMKDT SSFTKVSVTS FAVVTALYVA
301: LAFVGSSLFG AAVNSQITLS MPPHLVVTKV ALWATVLTPV TKYALEFAPF AIQLQHHLPE GMGPRARMFV RGGVGSAALL VILALALCVP YFQYVLSLTG
401: SLVSVAISVI FPCAFYLKIY WGRVPMSTVT INVVLILTGV VLAVVGTISS AMSLVQSIQR GHAA

Best Arabidopsis Sequence Match ( AT5G16740.1 )
(BLAST)

001: MVCVACVEEN KGCECEHEKP VRELVLEAAS ENSSFLHSVI NMVGMLIGLG QLSMPYAVES GGWMSIFLLI SFGILTTYTS HILGKCIRRN PKSKSYSDIG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG

Arabidopsis Description

AVT1HAmino acid transporter AVT1H [Source:UniProtKB/Swiss-Prot;Acc:Q9LFE3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.