Factsheet for Zm00001d018336_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052063_P003	Maize	plasma membrane	89.58	90.74
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	77.7	80.34
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	78.61	79.93
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	77.15	78.58
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	67.46	77.36
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	45.34	76.78
TraesCS6D01G331300.1	Wheat	plasma membrane	70.93	75.34
HORVU6Hr1G083720.2	Barley	plastid	78.06	73.37
TraesCS6B01G381900.1	Wheat	plasma membrane	66.91	71.62
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	64.17	66.48
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	64.72	65.56
Bra000217.1-P	Field mustard	plasma membrane	55.39	58.27
CDY35425	Canola	plasma membrane	55.39	58.27
CDY22507	Canola	plasma membrane	55.03	57.88
PGSC0003DMT400080507	Potato	peroxisome	55.21	57.74
CDY23868	Canola	cytosol, nucleus, plasma membrane	55.58	57.47
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	55.39	57.28
CDX79951	Canola	cytosol, nucleus, plasma membrane	55.39	57.28
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	56.12	57.28
CDY06942	Canola	cytosol, peroxisome, plasma membrane	55.76	57.12
VIT_08s0007g05210.t01	Wine grape	plasma membrane	53.93	57.06
CDY67831	Canola	cytosol, peroxisome, plasma membrane	55.58	57.04
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.58	56.93
Solyc03g078150.2.1	Tomato	peroxisome	54.3	56.57
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	14.81	52.94
KRH16006	Soybean	cytosol	32.36	51.91
KRH33027	Soybean	plasma membrane	54.84	51.46
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	43.14	51.3
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	40.95	50.22
KRH77523	Soybean	cytosol, nucleus, plasma membrane	40.95	47.36
KRH66774	Soybean	plasma membrane	23.03	47.19
Zm00001d037229_P001	Maize	plasma membrane	33.09	45.36
Zm00001d043640_P001	Maize	plasma membrane	13.71	44.38
Zm00001d003422_P001	Maize	cytosol, plasma membrane, vacuole	34.73	41.48
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	41.68	40.21
Zm00001d004340_P002	Maize	plasma membrane	40.59	38.95
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	35.28	36.69
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	17.0	34.44
Zm00001d041534_P002	Maize	plasma membrane	38.21	34.32
Zm00001d030751_P001	Maize	plasma membrane	38.76	33.54
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	10.6	32.22
Zm00001d004633_P001	Maize	plasma membrane	25.41	29.96
Zm00001d019225_P001	Maize	plasma membrane	19.2	24.53
Zm00001d017557_P001	Maize	plastid	18.46	23.38
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	18.46	20.4
Zm00001d044387_P001	Maize	nucleus	29.43	18.81

Protein Annotations

EnsemblPlants:Zm00001d018336_P002	EnsemblPlants:Zm00001d018336_T002	EnsemblPlantsGene:Zm00001d018336	EntrezGene:103627843	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF358	PFAM:PF01490	ProteinID:AQK75643.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000845535E	UniProt:A0A1D6HMV1	MapMan:24.2.3.4.7	:

Description

Transmembrane amino acid transporter family protein

Coordinates

chr5:-:218712053..218717522

Molecular Weight (calculated)

59412.9 Da

IEP (calculated)

4.850

GRAVY (calculated)

0.310

Length

547 amino acids

Sequence
(BLAST)

001: MAPEKPRKEQ EEEEDELMLE DGGIEESPRR SFEDCGDSDE EDDDNDEERD GDGVGSPRSF QSHKWPQSYR ETTDTYTIAA SPSFGYLGPS TSKYSLLDLG
101: RSGLGSDLKL PLLSDKADGK QDSVKTLPKT LGSIRDERVS FQLQHTGELY ITQGCNVTQT VFNGINVLAG VGLLSTPFTI HEAGWTGLAV LVCFAIVCCY
201: TGILLKHCFE SKDGISSYPD IGEAAFGRIG RLLISVSFGI ILYTELYTYC VEFIILEGDN LTTIFPKAGI DWFGIHVDGK HFFGVLTAIL VLPTVWLRDL
301: RVLSYLSAGG VIATLLVFLS VGLVGATDGI GFHSTGKVVN WSGMPFAIGI YGFCYSGHSV FPNIYQSMSD RSKFPKALFI CFAICTAMYG SFAVIGFLMF
401: GENTLSQITL NLPKHSIASK VALWTTVINP FTKYALLLNP LARSLEELRP EGFLNETSCS IILRTALVAS TVCIAFLLPF FGLVMALIGS LLSILVAVIM
501: PALCFLKIAQ NKATCPQVIA SVGIVILGVV SAALGTYSSV KKIAENY

Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.