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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
TargetP:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G348400.1 Wheat cytosol, peroxisome, plasma membrane 87.11 95.84
TraesCS6B01G382000.2 Wheat cytosol, peroxisome, plasma membrane 87.97 95.17
TraesCS6D01G331400.2 Wheat cytosol, peroxisome, plasma membrane 86.94 94.23
TraesCS6A01G348300.2 Wheat cytosol, plasma membrane, vacuole 72.85 88.89
TraesCS6D01G331300.1 Wheat plasma membrane 77.15 87.18
TraesCS6B01G381900.1 Wheat plasma membrane 70.27 80.04
Zm00001d018336_P002 Maize plasma membrane 73.37 78.06
EES07655 Sorghum plasma membrane 73.71 77.86
Zm00001d052063_P003 Maize plasma membrane 71.82 77.41
Os02t0788800-01 Rice cytosol, peroxisome, plasma membrane 39.52 71.21
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 59.62 64.26
Bra000217.1-P Field mustard plasma membrane 52.06 58.27
CDY35425 Canola plasma membrane 52.06 58.27
CDY22507 Canola plasma membrane 51.89 58.08
AT2G41190.1 Thale cress cytosol, peroxisome, plasma membrane 53.09 57.65
CDY06942 Canola cytosol, peroxisome, plasma membrane 52.58 57.3
Bra004605.1-P Field mustard cytosol, nucleus, plasma membrane 52.06 57.28
CDX79951 Canola cytosol, nucleus, plasma membrane 52.06 57.28
CDY23868 Canola cytosol, nucleus, plasma membrane 52.06 57.28
PGSC0003DMT400080507 Potato peroxisome 51.37 57.17
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 52.41 57.12
CDY67831 Canola cytosol, peroxisome, plasma membrane 52.23 57.04
VIT_08s0007g05210.t01 Wine grape plasma membrane 50.0 56.29
Solyc03g078150.2.1 Tomato peroxisome 49.83 55.24
KRH33027 Soybean plasma membrane 52.75 52.66
KRH71933 Soybean cytosol, peroxisome, plasma membrane 40.21 52.47
KRG95106 Soybean cytosol, peroxisome, plasma membrane 41.41 52.39
KRH16006 Soybean cytosol 30.58 52.2
HORVU2Hr1G075350.2 Barley endoplasmic reticulum, plasma membrane, vacuole 14.6 49.42
KRH66774 Soybean plasma membrane 22.51 49.06
HORVU4Hr1G022660.1 Barley extracellular 17.87 47.06
KRH77523 Soybean cytosol, nucleus, plasma membrane 37.97 46.72
HORVU7Hr1G038300.27 Barley plasma membrane 30.58 44.5
HORVU2Hr1G080420.1 Barley plasma membrane 31.79 43.53
HORVU2Hr1G080390.1 Barley plasma membrane 31.79 43.53
HORVU2Hr1G069080.4 Barley cytosol, peroxisome, plasma membrane 29.9 42.75
HORVU2Hr1G080350.5 Barley mitochondrion, plasma membrane, vacuole 31.27 41.27
HORVU2Hr1G080430.3 Barley cytosol 30.58 40.45
HORVU6Hr1G001480.1 Barley plasma membrane 41.24 40.4
HORVU2Hr1G008090.4 Barley cytosol, peroxisome, plasma membrane 37.97 39.32
HORVU5Hr1G020560.3 Barley plasma membrane 36.08 35.47
HORVU4Hr1G012350.1 Barley endoplasmic reticulum, plasma membrane 23.02 33.5
HORVU6Hr1G064740.1 Barley plasma membrane 18.38 25.42
HORVU2Hr1G068460.1 Barley endoplasmic reticulum, plasma membrane, vacuole 6.53 24.2
HORVU5Hr1G112210.1 Barley plasma membrane 17.53 24.0
HORVU5Hr1G053550.1 Barley plasma membrane 16.67 23.04
HORVU5Hr1G112960.2 Barley cytosol 11.51 19.14
HORVU2Hr1G068450.4 Barley mitochondrion 13.57 18.68
Protein Annotations
EnsemblPlants:HORVU6Hr1G083720.2EnsemblPlantsGene:HORVU6Hr1G083720GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF358PFAM:PF01490SEG:segTMHMM:TMhelixUniParc:UPI000B46CC65
UniProt:A0A287UYZ5MapMan:24.2.3.4.7::::
Description
No Description!
Coordinates
chrchr6H:-:552471499..552477462
Molecular Weight (calculated)
63145.3 Da
IEP (calculated)
4.938
GRAVY (calculated)
0.327
Length
582 amino acids
Sequence
(BLAST)
001: KTAPNNLPSS LPYHPSPLEA SRLVPSYSNP PRNPAFPPLV VPRGGMAAAA AAGRHRKEEE DEMLLDDGDI EESPRDSFRD SDDDDGEEEE EEEERGEDGD
101: GVGSFESRQW PQSYRETTDT YTIAASPIFG YLGPSTSKYS IDGGRSGVAS DLKLPFISDR LESVKSLRRH LLGSVRDEKL SFQYTGEIYV GQGCSVTQTV
201: FNGINVLAGV GLLSTPFTIH QAGWAGLAVL SVFAIICCYT GVLLKHCFES KDGIATYPDI GEAAFGRIGR LIISIILYTE LYSYCVEFII LEGDNMTSIF
301: PGVNLNLFGI HVDSKHFFGV LTALLVLPTV WLRDLRVLSY LSAGGVIATL VVFISVALVG TTEGVGFHQT GEAVKWSGMP FAIGIYGFCY SGHSVFPNIY
401: QSMSDRTKFP KALFICFVIC TAIYGSFAII GYLMFGDKTM SQITLNLPKE SFASKVALWT TVINPFTKFA LLLNPLARSL EELRPEGFLN ETIVSIILRT
501: SLVASTVVIA FLLPFFGLVM ALIGSLLSIL VAVIMPALCF LKIAQNKATR TQVIASVAII VVGVISAALG TYSSVASIIG YY
Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)
001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ
Arabidopsis Description
AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.