Factsheet for HORVU2Hr1G080420.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G080390.1	Barley	plasma membrane	100.0	100.0
TraesCS2D01G324300.1	Wheat	plasma membrane	93.65	89.04
TraesCS2A01G338800.1	Wheat	plasma membrane	93.65	89.04
TraesCS2B01G343200.2	Wheat	plasma membrane	86.59	81.42
Os04t0460200-01	Rice	endoplasmic reticulum	44.94	77.64
HORVU2Hr1G080350.5	Barley	mitochondrion, plasma membrane, vacuole	79.29	76.42
HORVU2Hr1G080430.3	Barley	cytosol	60.24	58.18
VIT_01s0026g02500.t01	Wine grape	plasma membrane	54.59	56.45
Solyc05g053970.2.1	Tomato	plasma membrane	45.65	55.11
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	22.12	54.97
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	18.82	53.33
HORVU2Hr1G069080.4	Barley	cytosol, peroxisome, plasma membrane	50.12	52.33
HORVU7Hr1G038300.27	Barley	plasma membrane	48.71	51.75
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	24.94	50.48
Solyc06g061260.1.1	Tomato	plasma membrane	22.59	49.74
KRG89633	Soybean	plasma membrane	44.71	46.68
PGSC0003DMT400082135	Potato	plasma membrane	11.06	46.08
HORVU2Hr1G075350.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	17.88	44.19
HORVU4Hr1G022660.1	Barley	extracellular	21.65	41.63
HORVU2Hr1G008090.4	Barley	cytosol, peroxisome, plasma membrane	44.0	33.27
HORVU4Hr1G012350.1	Barley	endoplasmic reticulum, plasma membrane	30.82	32.75
HORVU6Hr1G083720.2	Barley	plastid	43.53	31.79
HORVU5Hr1G020560.3	Barley	plasma membrane	40.71	29.22
HORVU6Hr1G001480.1	Barley	plasma membrane	40.71	29.12
HORVU5Hr1G112210.1	Barley	plasma membrane	24.71	24.71
HORVU6Hr1G064740.1	Barley	plasma membrane	23.76	23.99
HORVU5Hr1G053550.1	Barley	plasma membrane	22.12	22.33
HORVU2Hr1G068460.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	7.53	20.38
HORVU5Hr1G112960.2	Barley	cytosol	15.06	18.29
HORVU2Hr1G068450.4	Barley	mitochondrion	17.41	17.49
Os04t0460300-01	Rice	plastid	0.71	0.66

Protein Annotations

EnsemblPlants:HORVU2Hr1G080420.1	EnsemblPlantsGene:HORVU2Hr1G080420	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF465	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B480954
UniProt:A0A287ILJ5	MapMan:24.2.3.4.7	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:582658126..582659640

Molecular Weight (calculated)

44423.5 Da

IEP (calculated)

8.012

GRAVY (calculated)

0.911

Length

425 amino acids

Sequence
(BLAST)

001: MSYDVPLLGT QQATGPGKAP QGGALDDGNA SFVRTCLNGT NALAGVGLLS MPYALAEGGW LSLALLAAVA ATCWYTGLLL GRCMAADQAI RTYPDIGERA
101: FGRPGRLVVS AFMYAELYLV AIGFLILDGD NLDKLFPGAS LRLGPVSLAG KQLFVVLVAL MVAPTTWLRS LGVLAYVSAA GVFASVAIVL SVLWAAAVDG
201: VGFSGRATTV PLQLTGLPTA LGLYTFCYCT HAVFPTLYTS MKQKSQFPKM LAICFVLCTL NYGSMAVLGY LMYGDSVQSQ LTLNLPAAKL SSRIAIYTTV
301: VMPLSKYALV VTPIAAAIEE RFPGVVGEGA AVSVAARTLL VLSTVVVAIA LPFFGYLMAL VGSLLSVCAC MLLPCLCYVR IFGATSLTAL ETAAIMGILM
401: LGLLVAITGT YSSLMQIIHE LQVAV

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.