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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400019843 Potato peroxisome, plasma membrane, plastid, vacuole 89.22 60.67
Solyc05g053970.2.1 Tomato plasma membrane 86.27 25.0
PGSC0003DMT400076795 Potato plasma membrane 50.98 15.48
VIT_01s0026g02500.t01 Wine grape plasma membrane 53.92 13.38
PGSC0003DMT400076791 Potato plasma membrane 53.92 13.1
TraesCS1B01G058900.1 Wheat plasma membrane 52.94 12.62
Zm00001d037229_P001 Maize plasma membrane 49.02 12.53
TraesCS2B01G343300.2 Wheat plasma membrane 53.92 12.5
TraesCS2D01G324400.2 Wheat plasma membrane 52.94 12.27
TraesCS2A01G338600.1 Wheat plasma membrane 52.94 12.27
GSMUA_Achr10P... Banana plasma membrane 51.96 12.05
HORVU2Hr1G080430.3 Barley cytosol 51.96 12.05
KRG89633 Soybean plasma membrane 48.04 12.04
KXG19641 Sorghum plasma membrane 46.08 11.78
TraesCS4D01G284500.1 Wheat plasma membrane 42.16 11.68
TraesCS7B01G093100.1 Wheat plasma membrane 45.1 11.53
TraesCS7D01G189100.1 Wheat plasma membrane 45.1 11.53
PGSC0003DMT400008751 Potato plasma membrane 48.04 11.5
TraesCS7A01G188100.1 Wheat plasma membrane 44.12 11.28
HORVU7Hr1G038300.27 Barley plasma membrane 44.12 11.25
HORVU2Hr1G080390.1 Barley plasma membrane 46.08 11.06
HORVU2Hr1G080420.1 Barley plasma membrane 46.08 11.06
Os01t0597400-00 Rice cytosol, peroxisome, plasma membrane 47.06 10.84
Os06t0228500-01 Rice plasma membrane 43.14 10.65
Os01t0597600-01 Rice peroxisome, plasma membrane, vacuole 43.14 10.38
TraesCS2B01G299200.1 Wheat plasma membrane 41.18 10.32
HORVU2Hr1G069080.4 Barley cytosol, peroxisome, plasma membrane 41.18 10.32
TraesCS2A01G282000.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 41.18 10.32
TraesCS2A01G338800.1 Wheat plasma membrane 45.1 10.29
EES01014 Sorghum plasma membrane 43.14 10.14
TraesCS2B01G342900.1 Wheat plasma membrane 42.16 10.12
TraesCS2D01G280800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 40.2 10.07
OQU87120 Sorghum peroxisome, plasma membrane, vacuole 43.14 9.93
TraesCS2A01G339100.1 Wheat plasma membrane 41.18 9.88
TraesCS2D01G324300.1 Wheat plasma membrane 43.14 9.84
Zm00001d003422_P001 Maize cytosol, plasma membrane, vacuole 44.12 9.83
TraesCS4A01G018400.1 Wheat peroxisome, plasma membrane, vacuole 41.18 9.74
TraesCS4A01G018500.1 Wheat peroxisome, plasma membrane, vacuole 41.18 9.74
TraesCS4B01G285800.1 Wheat peroxisome, plasma membrane, vacuole 41.18 9.74
TraesCS2B01G343200.2 Wheat plasma membrane 43.14 9.73
TraesCS2D01G324000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 40.2 9.65
TraesCS3B01G499000.1 Wheat plasma membrane 38.24 9.54
HORVU2Hr1G080350.5 Barley mitochondrion, plasma membrane, vacuole 41.18 9.52
EES10943 Sorghum cytosol, peroxisome, plasma membrane 43.14 9.52
TraesCS4B01G285500.1 Wheat plasma membrane 40.2 9.51
TraesCS4D01G284600.1 Wheat peroxisome, plasma membrane, vacuole 40.2 9.49
TraesCS4A01G018300.1 Wheat peroxisome, plasma membrane, vacuole 33.33 8.37
PGSC0003DMT400055694 Potato extracellular, plasma membrane 28.43 7.86
PGSC0003DMT400080507 Potato peroxisome 39.22 7.65
PGSC0003DMT400028760 Potato cytosol, peroxisome, plasma membrane 35.29 6.81
PGSC0003DMT400094217 Potato plasma membrane 23.53 5.69
PGSC0003DMT400019190 Potato cytosol, nucleus, plasma membrane 33.33 5.65
PGSC0003DMT400086252 Potato plasma membrane 23.53 5.65
PGSC0003DMT400048045 Potato plasma membrane 20.59 4.92
Zm00001d044387_P001 Maize nucleus 40.2 4.79
PGSC0003DMT400045065 Potato plasma membrane, plastid 19.61 4.75
PGSC0003DMT400033422 Potato plasma membrane 19.61 4.63
Solyc05g050440.2.1 Tomato extracellular, plasma membrane, vacuole 2.94 1.75
PGSC0003DMT400036273 Potato cytosol, nucleus, plasma membrane 1.96 0.45
Os04t0460200-01 Rice endoplasmic reticulum 0.98 0.41
Solyc06g061270.1.1 Tomato cytosol, plasma membrane 0.0 0.0
Os05t0364700-00 Rice extracellular 0.0 0.0
Os04t0460300-01 Rice plastid 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400082135EnsemblPlantsGene:PGSC0003DMG400032285GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF280PFAM:PF01490PGSC:PGSC0003DMG400032285TMHMM:TMhelixUniParc:UPI0002950393
UniProt:M1D5Q1MapMan:35.1::::
Description
Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400032285]
Coordinates
chr00:-:28606282..28606793
Molecular Weight (calculated)
11329.6 Da
IEP (calculated)
9.990
GRAVY (calculated)
1.077
Length
102 amino acids
Sequence
(BLAST)
001: MAIEDKLPLR KRKFIVSYFI RTFLVISTVI VALTIPFFGY VMTFTGALLG VTVSILLPCL CYLKIKKPSY LEVMFIGMVL VCGSSIAISG TYTSLKNIIS
101: HV
Best Arabidopsis Sequence Match ( AT3G28960.4 )
(BLAST)
001: MNADRNIKTY PDIGERAFGR PGRIIVSVFM HLELYLVTTG FLILEGDNLH NLFPGFTIEM IGLRLNGKQA FMATVAFVIM PTLWWDNLSV LSYVSMSGVL
101: ATTVTLGSIS WIGAFDGIGF HQKGKLINWS GIPTALSLYA FCYGAHPVLP TLYSSMKSKH QFNNVLLICF ILCTIGYTSM AVLGYLMYGS QTLSQITLNL
201: PIHKTSSKVA IYTTLVNPVA KYALMITPTV NTIKDWFPSR YSKKAYLHLL ISTFFIISSV VIAETLPFFG YMMSLVGALL SVTVSILLPC LCYLKIFGNY
301: KKIGCETIML FGMVVMSVFV GVIGTYIALR DIIGSV
Arabidopsis Description
AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.