Factsheet for TraesCS2D01G324400.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G343300.2	Wheat	plasma membrane	98.41	98.41
TraesCS2A01G338600.1	Wheat	plasma membrane	97.27	97.27
HORVU2Hr1G080430.3	Barley	cytosol	88.18	88.18
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	77.73	74.03
Zm00001d003422_P001	Maize	cytosol, plasma membrane, vacuole	76.36	73.36
TraesCS2D01G324000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	59.09	61.18
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	23.18	59.65
VIT_01s0026g02500.t01	Wine grape	plasma membrane	55.45	59.37
TraesCS2D01G324300.1	Wheat	plasma membrane	59.77	58.84
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	20.0	58.67
Solyc05g053970.2.1	Tomato	plasma membrane	46.82	58.52
Solyc06g061260.1.1	Tomato	plasma membrane	23.86	54.4
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	25.68	53.81
TraesCS4D01G284600.1	Wheat	peroxisome, plasma membrane, vacuole	52.27	53.24
PGSC0003DMT400082135	Potato	plasma membrane	12.27	52.94
TraesCS7D01G189100.1	Wheat	plasma membrane	47.5	52.38
TraesCS2D01G280800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.82	50.61
KRG89633	Soybean	plasma membrane	45.91	49.63
TraesCS4D01G284500.1	Wheat	plasma membrane	40.45	48.37
TraesCS6D01G331300.1	Wheat	plasma membrane	41.36	35.34
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	41.36	33.89
TraesCS6D01G003200.1	Wheat	cytosol, nucleus, plasma membrane	41.59	32.11
TraesCS4D01G072600.1	Wheat	mitochondrion, plasma membrane	33.86	31.91
TraesCS5D01G091100.1	Wheat	plasma membrane	39.32	29.03
TraesCS6D01G235500.1	Wheat	plasma membrane	24.77	25.89
TraesCS2D01G400900.1	Wheat	plasma membrane	23.64	24.59
TraesCS5D01G485100.1	Wheat	plasma membrane	22.95	23.99
TraesCS5D01G485300.1	Wheat	plasma membrane	22.95	23.93
TraesCS2D01G278600.1	Wheat	plasma membrane	20.91	21.9
TraesCS5D01G180000.1	Wheat	plastid	18.41	20.98

Protein Annotations

EnsemblPlants:TraesCS2D01G324400.2	EnsemblPlantsGene:TraesCS2D01G324400	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF465	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr2D:+:417210371..417212046

Molecular Weight (calculated)

46353.8 Da

IEP (calculated)

7.591

GRAVY (calculated)

0.798

Length

440 amino acids

Sequence
(BLAST)

001: MAIGGAAPHD SPGGLPDFEK PLLHAHGGLQ AGKDPAAAHD HEAQCSPEAG GATSLRTCFN GLNALSGVGL LSIPYALAEG GWLSLVLLLL VAIVCCYTGQ
101: LLRTCMGASP DVRGYPDIGA LAFGAKGRFA VSAFMYAELY LVAIGFLILE GDNLDKLFPG TSLSLGGVLV LSGKHLFIVL VSIFILPTTW LRNLGVLAYV
201: SASGVLASVV LVFCVLWAAV VDGVGFQGKG TMLNVSGLPT ALGLYTFCYC GHAIFPTLCN SMKEKDKFSK VLVICFVACT LNYGSMAILG YLMYGDDVES
301: QVTLNLPEGK LSSKLAIYTA LINPFSKYAL MVTPVATAVE EKLLAGNKRS LNMLIRTFIV ISTVIVALTV PFFGHLMALV GSLLSVMASM LLPCICYLKI
401: FGTARCSRAE VALIVMIIVL GSLVAASGTY SSLQKIIHEF

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.