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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G382000.2 Wheat cytosol, peroxisome, plasma membrane 97.21 97.03
TraesCS6A01G348400.1 Wheat cytosol, peroxisome, plasma membrane 94.79 96.22
TraesCS6D01G331300.1 Wheat plasma membrane 83.43 86.99
HORVU6Hr1G083720.2 Barley plastid 94.23 86.94
Zm00001d018336_P002 Maize plasma membrane 78.58 77.15
EES07655 Sorghum plasma membrane 78.4 76.41
Zm00001d052063_P003 Maize plasma membrane 76.35 75.93
Os02t0788800-01 Rice cytosol, peroxisome, plasma membrane 42.83 71.21
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 64.99 64.63
Bra000217.1-P Field mustard plasma membrane 56.61 58.46
CDY35425 Canola plasma membrane 56.61 58.46
CDY22507 Canola plasma membrane 56.05 57.88
AT2G41190.1 Thale cress cytosol, peroxisome, plasma membrane 57.54 57.65
PGSC0003DMT400080507 Potato peroxisome 56.05 57.55
CDY06942 Canola cytosol, peroxisome, plasma membrane 57.17 57.49
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 56.98 57.3
Bra004605.1-P Field mustard cytosol, nucleus, plasma membrane 56.42 57.28
CDY23868 Canola cytosol, nucleus, plasma membrane 56.42 57.28
CDX79951 Canola cytosol, nucleus, plasma membrane 56.42 57.28
CDY67831 Canola cytosol, peroxisome, plasma membrane 56.8 57.22
Solyc03g078150.2.1 Tomato peroxisome 54.56 55.81
VIT_08s0007g05210.t01 Wine grape plasma membrane 53.07 55.13
KRG95106 Soybean cytosol, peroxisome, plasma membrane 44.69 52.17
KRH33027 Soybean plasma membrane 56.42 51.97
KRH71933 Soybean cytosol, peroxisome, plasma membrane 42.83 51.57
KRH16006 Soybean cytosol 32.59 51.32
KRH66774 Soybean plasma membrane 23.65 47.57
KRH77523 Soybean cytosol, nucleus, plasma membrane 40.78 46.3
TraesCS7D01G189100.1 Wheat plasma membrane 33.15 44.61
TraesCS2D01G324000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 33.89 42.82
TraesCS2D01G324300.1 Wheat plasma membrane 34.82 41.83
TraesCS2D01G280800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 31.66 41.77
TraesCS2D01G324400.2 Wheat plasma membrane 33.89 41.36
TraesCS6D01G003200.1 Wheat cytosol, nucleus, plasma membrane 43.02 40.53
TraesCS4D01G284600.1 Wheat peroxisome, plasma membrane, vacuole 29.61 36.81
TraesCS5D01G091100.1 Wheat plasma membrane 38.92 35.07
TraesCS4D01G284500.1 Wheat plasma membrane 23.28 33.97
TraesCS4D01G072600.1 Wheat mitochondrion, plasma membrane 25.88 29.76
TraesCS6D01G235500.1 Wheat plasma membrane 19.74 25.18
TraesCS2D01G400900.1 Wheat plasma membrane 19.37 24.59
TraesCS5D01G485300.1 Wheat plasma membrane 18.99 24.17
TraesCS5D01G485100.1 Wheat plasma membrane 18.44 23.52
TraesCS2D01G278600.1 Wheat plasma membrane 17.88 22.86
TraesCS5D01G180000.1 Wheat plastid 15.08 20.98
Protein Annotations
EnsemblPlants:TraesCS6D01G331400.2EnsemblPlantsGene:TraesCS6D01G331400InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF358PFAM:PF01490
SEG:segTMHMM:TMhelixMapMan:24.2.3.4.7:::
Description
No Description!
Coordinates
chr6D:-:434252973..434257762
Molecular Weight (calculated)
58475.9 Da
IEP (calculated)
4.766
GRAVY (calculated)
0.446
Length
537 amino acids
Sequence
(BLAST)
001: MAAAAARQRK EEEDEMLLDD GDIEESPRDS FRDSDDEGEE EGRGEDGDGV GSFESHQWPQ SYRETTDTYT IAASPIFGYL GPSTSKYSID GGRSGLASDL
101: RLPFISDKLE SVKSLRRHLL GSVRDEKLSF QYTGEIYVGQ GCSVTQTVFN GVNVLAGVGL LSAPFTIHEA GWAGLAVLSV FAIICCYTGV LLKHCFESKD
201: GIATYPDIGE AAFGRIGRLI ISIILYTELY SYCVEFIILE GDNMTSIFPD VNINLFGIHV DSKHFFGVLT ALVVLPTVWL RDLRVLSYLS AGGVIATLVV
301: FISVALVGTT EGVGFHQTGE AVKWSGMPFA IGIYGFCYSG HSVFPNIYQS MSDRTKFPKA LFICFIVCTA IYGSFAIIGY LMFGDKTLSQ ITLNLPKESF
401: ASKVALWTTV INPFTKYPLE FLSFALLLNP LARSLEELRP EGFLNETIVS IILRTSLVAS TVVIAFLLPF FGLVMALIGS LLSILVAIIM PALCFLKITQ
501: NKATRTQVIA SVVIIVVGVI SATLGTYSSV ASIIGYY
Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)
001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ
Arabidopsis Description
AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.