Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH71933 | Soybean | cytosol, peroxisome, plasma membrane | 70.67 | 92.38 |
KRH16006 | Soybean | cytosol | 39.62 | 67.74 |
KRH77523 | Soybean | cytosol, nucleus, plasma membrane | 50.94 | 62.79 |
KRG95106 | Soybean | cytosol, peroxisome, plasma membrane | 49.4 | 62.61 |
KRH27948 | Soybean | plasma membrane | 17.84 | 60.12 |
TraesCS6A01G348300.2 | Wheat | cytosol, plasma membrane, vacuole | 48.2 | 58.91 |
GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 53.86 | 58.15 |
TraesCS6A01G348400.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.32 | 57.66 |
TraesCS6D01G331300.1 | Wheat | plasma membrane | 49.91 | 56.5 |
TraesCS6D01G331400.2 | Wheat | cytosol, peroxisome, plasma membrane | 51.97 | 56.42 |
TraesCS6B01G382000.2 | Wheat | cytosol, peroxisome, plasma membrane | 51.63 | 55.95 |
KRH66774 | Soybean | plasma membrane | 25.39 | 55.43 |
Zm00001d018336_P002 | Maize | plasma membrane | 51.46 | 54.84 |
EES07655 | Sorghum | plasma membrane | 51.8 | 54.81 |
Zm00001d052063_P003 | Maize | plasma membrane | 50.43 | 54.44 |
TraesCS6B01G381900.1 | Wheat | plasma membrane | 47.34 | 54.01 |
EES07657 | Sorghum | plasma membrane | 47.68 | 53.26 |
HORVU6Hr1G083720.2 | Barley | plastid | 52.66 | 52.75 |
Zm00001d018340_P001 | Maize | cytosol, peroxisome, plasma membrane | 46.14 | 50.95 |
Os02t0788800-01 | Rice | cytosol, peroxisome, plasma membrane | 26.24 | 47.37 |
KRG99573 | Soybean | cytosol, nucleus, plasma membrane | 8.58 | 46.73 |
KRG91942 | Soybean | plasma membrane | 39.97 | 42.83 |
KRH71649 | Soybean | cytosol, nucleus, plasma membrane | 38.94 | 41.88 |
KRH33248 | Soybean | cytosol, nucleus, plasma membrane | 38.59 | 41.51 |
KRH40411 | Soybean | plasma membrane | 19.04 | 41.26 |
KRG89633 | Soybean | plasma membrane | 28.64 | 41.03 |
KRH34828 | Soybean | plasma membrane | 38.94 | 40.46 |
KRH30199 | Soybean | extracellular, plasma membrane | 25.56 | 39.95 |
KRH40095 | Soybean | plasma membrane | 29.16 | 39.91 |
KRH40094 | Soybean | plasma membrane | 29.16 | 39.81 |
KRH01177 | Soybean | plasma membrane | 28.3 | 38.46 |
KRG98784 | Soybean | plasma membrane | 23.84 | 37.77 |
KRH30194 | Soybean | plasma membrane | 27.62 | 36.84 |
KRG98240 | Soybean | plasma membrane | 27.44 | 36.61 |
KRH38592 | Soybean | endoplasmic reticulum | 14.58 | 35.56 |
KRG99991 | Soybean | cytosol, nucleus, peroxisome | 16.81 | 34.39 |
KRH58803 | Soybean | mitochondrion | 24.36 | 30.87 |
KRH75803 | Soybean | mitochondrion | 16.12 | 30.03 |
KRG97383 | Soybean | mitochondrion | 23.33 | 28.81 |
KRH31531 | Soybean | mitochondrion | 21.78 | 28.1 |
KRG96325 | Soybean | plasma membrane | 17.67 | 24.41 |
KRH68062 | Soybean | plasma membrane | 17.32 | 24.05 |
KRH39423 | Soybean | plasma membrane | 16.12 | 21.96 |
KRH28932 | Soybean | cytosol, plasma membrane | 13.21 | 21.39 |
Protein Annotations
EMBL:ACUP02006231 | EnsemblPlants:KRH33027 | EnsemblPlantsGene:GLYMA_10G094000 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 |
GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF457 | PFAM:PF01490 | ProteinID:KRH33027 | ProteinID:KRH33027.1 |
SEG:seg | TMHMM:TMhelix | UniParc:UPI00023C9DA2 | UniProt:A0A0R0HZ90 | MapMan:24.2.3.4.7 | : |
Description
hypothetical protein
Coordinates
chr10:+:13429766..13437451
Molecular Weight (calculated)
63785.1 Da
IEP (calculated)
4.867
GRAVY (calculated)
0.316
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRNDSSNKE KEKNLDDQPL FDLNYDGDEE DAVVDKEQQE IEGVKYQSES SSDGDDDDGG GRHAANGRAQ PDSFSSQQWP QSYKETTDSY TIAAAPNFES
101: VLRGPSFIYS SFDNRSKSNL DIDGKTPFLS APEGIRQSTW WEKASVERLV SGELPIGYGC SFTQTIFNGI NVIAGVGLLS TPFTVNQAGW MSLAVMLLFA
201: VMCCYTATLL RYCFESREGI ITYPDVGEAA FGRYGRIAVS IILYTELYSY CVEFITLEGD NLTSLFPGTS LDLGGFKLDS MHMFGVLTAL IILPTVWLKD
301: LRIISYLSGG GVVATILIMI CVFCVGTIDS VGFHHTGQLV KWNGIPFAIG VYGFCFAGHS VFPNIYQSMA DKKQFTKALI ICFVLCVLIY GGTASMGYLM
401: FGDGTLSQIT LNMPPGAFAS KVALWTTVIN PLTKYPFCQN YLAYESFKIC HGLIKCSNPF SLAFLNSNKY ALLMNPLARS LEELLPDRIS SSYWCFMLLR
501: TTLVASTVCV AFLVPFFGLV MALIGSLFSI LVSAIMPSLC FLKIIGKKAT KTQVALSVAI AAFGVICGIL GTYSSLLSIA DSY
101: VLRGPSFIYS SFDNRSKSNL DIDGKTPFLS APEGIRQSTW WEKASVERLV SGELPIGYGC SFTQTIFNGI NVIAGVGLLS TPFTVNQAGW MSLAVMLLFA
201: VMCCYTATLL RYCFESREGI ITYPDVGEAA FGRYGRIAVS IILYTELYSY CVEFITLEGD NLTSLFPGTS LDLGGFKLDS MHMFGVLTAL IILPTVWLKD
301: LRIISYLSGG GVVATILIMI CVFCVGTIDS VGFHHTGQLV KWNGIPFAIG VYGFCFAGHS VFPNIYQSMA DKKQFTKALI ICFVLCVLIY GGTASMGYLM
401: FGDGTLSQIT LNMPPGAFAS KVALWTTVIN PLTKYPFCQN YLAYESFKIC HGLIKCSNPF SLAFLNSNKY ALLMNPLARS LEELLPDRIS SSYWCFMLLR
501: TTLVASTVCV AFLVPFFGLV MALIGSLFSI LVSAIMPSLC FLKIIGKKAT KTQVALSVAI AAFGVICGIL GTYSSLLSIA DSY
001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ
Arabidopsis Description
AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.