CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01177	Soybean	plasma membrane	54.95	40.09
KRH40095	Soybean	plasma membrane	51.76	38.03
KRH40411	Soybean	plasma membrane	31.95	37.17
KRH40094	Soybean	plasma membrane	49.84	36.53
VIT_06s0061g00570.t01	Wine grape	plasma membrane	29.71	36.19
AT3G28960.2	Thale cress	plasma membrane	40.58	31.36
VIT_14s0108g00690.t01	Wine grape	plasma membrane	41.53	31.18
PGSC0003DMT400076791	Potato	plasma membrane	40.89	30.48
VIT_14s0108g00630.t01	Wine grape	plasma membrane	41.53	30.37
VIT_14s0108g00620.t01	Wine grape	plasma membrane	41.21	30.14
Bra025369.1-P	Field mustard	plasma membrane	38.66	29.88
CDX85233	Canola	plasma membrane	38.66	29.88
CDX86397	Canola	plasma membrane	38.66	29.88
Bra033075.1-P	Field mustard	plasma membrane	38.34	29.63
CDY44419	Canola	plasma membrane	38.34	29.63
KRG98784	Soybean	plasma membrane	34.82	29.62
PGSC0003DMT400008751	Potato	plasma membrane	38.66	28.4
VIT_06s0009g01140.t01	Wine grape	plasma membrane	37.7	28.03
Solyc03g013160.2.1	Tomato	plasma membrane	37.7	27.7
KRH30199	Soybean	extracellular, plasma membrane	32.27	27.08
KRH30194	Soybean	plasma membrane	36.1	25.86
KRG98240	Soybean	plasma membrane	35.78	25.63
PGSC0003DMT400076795	Potato	plasma membrane	27.48	25.6
KRH27948	Soybean	plasma membrane	14.06	25.43
Solyc03g013440.2.1	Tomato	plasma membrane	25.56	23.12
KRG89633	Soybean	plasma membrane	30.03	23.1
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	29.71	20.85
KRG91942	Soybean	plasma membrane	36.1	20.77
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	30.35	20.65
CDY04048	Canola	plasma membrane	38.02	20.52
KRH77523	Soybean	cytosol, nucleus, plasma membrane	30.99	20.51
KRH66774	Soybean	plasma membrane	16.93	19.85
KRH34828	Soybean	plasma membrane	35.14	19.61
KRH16006	Soybean	cytosol	21.09	19.35
KRH38592	Soybean	endoplasmic reticulum	14.7	19.25
KRH33248	Soybean	cytosol, nucleus, plasma membrane	32.91	19.0
KRH71649	Soybean	cytosol, nucleus, plasma membrane	32.59	18.82
KRG99991	Soybean	cytosol, nucleus, peroxisome	16.29	17.89
KRH33027	Soybean	plasma membrane	30.03	16.12
KRG97383	Soybean	mitochondrion	21.73	14.41
KRH58803	Soybean	mitochondrion	20.77	14.13
KRH31531	Soybean	mitochondrion	18.53	12.83
KRH28932	Soybean	cytosol, plasma membrane	14.7	12.78
KRH68062	Soybean	plasma membrane	15.65	11.67
KRG96325	Soybean	plasma membrane	15.65	11.61
KRH39423	Soybean	plasma membrane	15.02	10.98
KRG99573	Soybean	cytosol, nucleus, plasma membrane	1.28	3.74

Protein Annotations

EMBL:ACUP02000492	EnsemblPlants:KRH75803	EnsemblPlantsGene:GLYMA_01G110700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	PFAM:PF01490	ProteinID:KRH75803	ProteinID:KRH75803.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0006ED5830	UniProt:A0A0R0LG36	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:+:37589963..37591593

Molecular Weight (calculated)

35673.1 Da

IEP (calculated)

10.698

GRAVY (calculated)

0.211

Length

313 amino acids

Sequence
(BLAST)

001: MRLFTFKLES KLIARRRHHV TPSLRGSLVP LRRRHESSHF RFSDNDKSLP SSHRPKVRWK ASSLPRRRSS QSRSRNRRKG HFVAGLHRSP FRENEEKVIA
101: LHPSTENIAS FFGTCLNRLN AISSVGILSV PYALASEIRL SLAFLFAIAT VVFYTYMLIK KCMDKYLNSR TYPDIGELAF GKIGRLIVSV PMYTKLYLVS
201: IGFLILEANN LIWLDNLSLL SYVSASGVFA FTFIILSISW TATFDGVGFH QKVLLLCFLL TTMGCASMAM IGYLMFGADI ESQITLNLLV NKENSKLAIY
301: ITLVRKFYCM YII

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.