Factsheet for VIT_14s0108g00620.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00690.t01	Wine grape	plasma membrane	81.07	83.21
VIT_14s0108g00630.t01	Wine grape	plasma membrane	82.48	82.48
VIT_06s0061g00570.t01	Wine grape	plasma membrane	45.79	76.26
VIT_06s0009g01140.t01	Wine grape	plasma membrane	64.72	65.8
PGSC0003DMT400076795	Potato	plasma membrane	49.53	63.1
PGSC0003DMT400076791	Potato	plasma membrane	60.98	62.14
KRH40095	Soybean	plasma membrane	61.68	61.97
KRH40411	Soybean	plasma membrane	38.32	60.97
KRH40094	Soybean	plasma membrane	60.51	60.66
KRH01177	Soybean	plasma membrane	60.75	60.61
AT3G28960.2	Thale cress	plasma membrane	56.31	59.51
PGSC0003DMT400008751	Potato	plasma membrane	58.88	59.15
Bra025369.1-P	Field mustard	plasma membrane	55.84	59.01
CDX85233	Canola	plasma membrane	55.84	59.01
CDX86397	Canola	plasma membrane	55.84	59.01
Solyc03g013440.2.1	Tomato	plasma membrane	47.43	58.67
CDY44419	Canola	plasma membrane	55.37	58.52
Bra033075.1-P	Field mustard	plasma membrane	55.37	58.52
KRH30199	Soybean	extracellular, plasma membrane	50.93	58.45
Solyc03g013160.2.1	Tomato	plasma membrane	57.71	57.98
VIT_01s0026g02500.t01	Wine grape	plasma membrane	53.74	55.96
KRG98240	Soybean	plasma membrane	56.78	55.61
KRH30194	Soybean	plasma membrane	56.54	55.38
KRG98784	Soybean	plasma membrane	47.43	55.16
VIT_19s0027g01890.t01	Wine grape	plasma membrane	43.69	53.89
VIT_19s0027g01860.t01	Wine grape	plasma membrane, plastid	49.53	52.48
VIT_19s0027g01880.t01	Wine grape	plasma membrane	49.53	52.09
VIT_19s0027g01870.t01	Wine grape	plasma membrane, plastid	48.36	50.86
KRH75803	Soybean	mitochondrion	30.14	41.21
CDY04048	Canola	plasma membrane	54.67	40.34
VIT_08s0007g05210.t01	Wine grape	plasma membrane	38.55	31.91
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	40.65	30.91
VIT_05s0062g01150.t01	Wine grape	plasma membrane	29.67	29.26
VIT_03s0038g03900.t01	Wine grape	plasma membrane	21.96	22.07
VIT_07s0031g02140.t01	Wine grape	plasma membrane	21.26	21.56
VIT_05s0062g01130.t01	Wine grape	plasma membrane	15.89	21.18

Protein Annotations

EntrezGene:100261080	wikigene:100261080	EntrezGene:100854089	wikigene:100854089	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM
ProteinID:CBI22204	ProteinID:CBI22204.3	UniProt:D7SXA7	EMBL:FN595239	GO:GO:0003333	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100261080	wikigene:LOC100261080	EntrezGene:LOC100854089	wikigene:LOC100854089	PFAM:PF01490
PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	TMHMM:TMhelix	UniParc:UPI00015C9F9C	ArrayExpress:VIT_14s0108g00620	EnsemblPlantsGene:VIT_14s0108g00620
EnsemblPlants:VIT_14s0108g00620.t01	RefSeq:XP_002283458	RefSeq:XP_002283458.2	RefSeq:XP_003633854	RefSeq:XP_003633854.1	:

Description

No Description!

Coordinates

chr14:-:29344663..29346160

Molecular Weight (calculated)

46942.5 Da

IEP (calculated)

6.633

GRAVY (calculated)

0.827

Length

428 amino acids

Sequence
(BLAST)

001: MAPEQLDGFS LAFPLLHDES QNVEDMEYYS TGCKLDLGST SFFKTCFNGL NALSGIGILS VPYALASGGW LSLMLLFVIA LATFYTGLLL QRCMDVDLNI
101: RTYPDIGEQA FGKKGRLMVS IFMYLELYLV ATGFLILEGD NLHNLFPMVG FEIFGQVIDG RQSFILISGL VILPSVCFYN LNMLSYISAS GVFACIIILG
201: SILWTGVFDG VGFHGKGTTL NWKGIPTAFS LYAFCYCAHP VFPTLYTSMR KKNQFSTVLL VGFVFCTITY AAMAVLGYLM FGSEVQSQIT LNLPIEKLSS
301: RVAIYTTLVN PISKYALIVV PIVNATENWF PYCCNRRLFS LLIRTALVFS TIIVALTVPF FGSLMSLVGA FLSVTGSILL PCLCYLKISG IYHKFGIELV
401: IIIGVMLMGI SAGIVGTYTS IVEIIGQL

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.