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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • plasma membrane 4
  • golgi 2
  • extracellular 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:golgi, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_10s0003g01830.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G38250.1 VIT_10s0003g01830.t01 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0031g02140.t01 Wine grape plasma membrane 71.83 72.51
CDY21456 Canola plasma membrane 66.67 70.47
CDY70145 Canola plasma membrane 66.67 70.47
Bra000591.1-P Field mustard plasma membrane 66.43 70.05
AT2G42005.1 Thale cress plasma membrane 67.37 69.49
AT4G38250.1 Thale cress plasma membrane 70.66 69.04
Bra033558.1-P Field mustard plasma membrane 57.51 68.44
CDY59097 Canola plastid 70.89 68.17
CDY54797 Canola plastid 70.66 67.64
Os04t0565500-01 Rice cytosol, plasma membrane, plastid 62.44 62.59
GSMUA_Achr1P02810_001 Banana cytosol, plasma membrane, vacuole 57.51 62.18
TraesCS6B01G271500.1 Wheat plasma membrane 61.03 61.76
TraesCS6A01G254100.1 Wheat plasma membrane 60.8 61.52
EES07473 Sorghum plasma membrane 61.5 61.5
HORVU6Hr1G064740.1 Barley plasma membrane 60.56 61.28
TraesCS6D01G235500.1 Wheat plasma membrane 60.33 61.05
TraesCS2D01G400900.1 Wheat plasma membrane 60.56 60.99
TraesCS2B01G421800.1 Wheat plasma membrane 60.56 60.99
TraesCS2A01G403800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 60.33 60.76
Zm00001d017557_P001 Maize plastid 61.27 60.42
Solyc10g048180.1.1 Tomato plasma membrane 59.62 59.48
GSMUA_Achr5P11060_001 Banana plasma membrane 55.16 59.34
OQU82139 Sorghum peroxisome 59.62 59.21
PGSC0003DMT400033422 Potato plasma membrane 59.62 58.8
GSMUA_Achr4P25490_001 Banana plasma membrane 53.99 58.67
GSMUA_AchrUn_... Banana plasma membrane, plastid, vacuole 55.63 56.7
Os02t0670900-02 Rice endoplasmic reticulum, plasma membrane, plastid 61.74 54.0
EES12671 Sorghum plastid 62.44 53.63
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 61.74 53.13
VIT_05s0062g01130.t01 Wine grape plasma membrane 23.94 31.78
VIT_19s0027g01860.t01 Wine grape plasma membrane, plastid 23.94 25.25
VIT_19s0027g01870.t01 Wine grape plasma membrane, plastid 21.36 22.36
VIT_19s0027g01880.t01 Wine grape plasma membrane 21.36 22.36
VIT_14s0108g00690.t01 Wine grape plasma membrane 21.83 22.3
VIT_14s0108g00630.t01 Wine grape plasma membrane 22.3 22.2
VIT_14s0108g00620.t01 Wine grape plasma membrane 22.07 21.96
VIT_01s0026g02500.t01 Wine grape plasma membrane 20.89 21.65
VIT_19s0027g01890.t01 Wine grape plasma membrane 17.37 21.33
VIT_06s0009g01140.t01 Wine grape plasma membrane 20.42 20.67
VIT_13s0019g04660.t01 Wine grape cytosol, nucleus, plasma membrane 25.12 19.01
VIT_06s0061g00570.t01 Wine grape plasma membrane 11.27 18.68
VIT_08s0007g05210.t01 Wine grape plasma membrane 22.3 18.38
VIT_05s0062g01150.t01 Wine grape plasma membrane 18.54 18.2
Protein Annotations
EntrezGene:100241728wikigene:100241728MapMan:24.2.3.4.4InterPro:AA_transpt_TMEMBL:AM430024ProteinID:CAN64709
ProteinID:CAN64709.1ProteinID:CCB60530ProteinID:CCB60530.1UniProt:F6I0R4EMBL:FN596508GO:GO:0003333
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005773GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020
GO:GO:0016021EntrezGene:LOC100241728wikigene:LOC100241728PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF464
TIGR:TC60841TMHMM:TMhelixUniParc:UPI0001982F54ArrayExpress:VIT_03s0038g03900EnsemblPlantsGene:VIT_03s0038g03900EnsemblPlants:VIT_03s0038g03900.t01
unigene:Vvi.17680RefSeq:XP_002282927RefSeq:XP_002282927.1SEG:seg::
Description
No Description!
Coordinates
chr3:-:2857245..2858842
Molecular Weight (calculated)
46338.0 Da
IEP (calculated)
7.049
GRAVY (calculated)
0.842
Length
426 amino acids
Sequence
(BLAST)
001: MVFSKEASSS SHGLNPMSPE EAPLLPKLKL LSSQPKTFAN VFIAVVGAGV LGLPYCFKRT GWVVSLLMLF SVAALTHHCM MLLVRTRRRL ESVMGFTNIA
101: SFGDLGFIVC GSVGRFAVDL MLVLSQAGFC VGYLIFIANT LANLFNSPTP TNLHPRILGL MPKTVYIWGC IPFQLGLNSI STLTHMAPLS IFADIVDVGA
201: MGVVMIEDVF IFFKNRPSVE AVGSLSMFFY GLGVAVYAFE GVGMVLPIES ETQEREKFGK VLALAMASIS LMYGGFGALG YFAFGEDTKD IITANLGTGL
301: VSFLVQLGLC VNLFFTFPLM MNPVYEVVER RLYNGRYCLW LRWLLVLTVI LVALLVPNFT DFLSLVGSSV CCGLGFVLPA LFHLMVFKEE MGWGGVSLDV
401: GIVVVGVVLG VSGTWYSLVE IFSVKV
Best Arabidopsis Sequence Match ( AT2G42005.1 )
(BLAST)
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.