CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05123

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65990.1	EES05123	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	91.94	92.12
OQU82139	Sorghum	peroxisome	79.44	91.84
Os04t0565500-01	Rice	cytosol, plasma membrane, plastid	76.01	88.71
TraesCS2A01G403800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	73.59	86.29
TraesCS2B01G421800.1	Wheat	plasma membrane	73.39	86.05
TraesCS2D01G400900.1	Wheat	plasma membrane	73.19	85.82
EES07473	Sorghum	plasma membrane	67.74	78.87
GSMUA_Achr1P02810_001	Banana	cytosol, plasma membrane, vacuole	57.66	72.59
GSMUA_Achr5P11060_001	Banana	plasma membrane	54.03	67.68
GSMUA_AchrUn_...	Banana	plasma membrane, plastid, vacuole	55.85	66.27
GSMUA_Achr4P25490_001	Banana	plasma membrane	52.22	66.07
VIT_07s0031g02140.t01	Wine grape	plasma membrane	54.23	63.74
VIT_03s0038g03900.t01	Wine grape	plasma membrane	53.63	62.44
PGSC0003DMT400045065	Potato	plasma membrane, plastid	52.02	61.28
CDY70145	Canola	plasma membrane	49.6	61.04
CDY21456	Canola	plasma membrane	49.6	61.04
Bra000591.1-P	Field mustard	plasma membrane	49.4	60.64
Solyc02g082510.1.1	Tomato	plasma membrane	51.61	60.24
PGSC0003DMT400086252	Potato	plasma membrane	51.61	60.24
PGSC0003DMT400048045	Potato	plasma membrane	51.61	59.95
AT2G42005.1	Thale cress	plasma membrane	49.8	59.81
Solyc03g032090.1.1	Tomato	plasma membrane	51.41	59.72
AT4G38250.1	Thale cress	plasma membrane	52.22	59.4
AT5G65990.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	50.4	58.55
PGSC0003DMT400094217	Potato	plasma membrane	49.4	58.06
CDY59097	Canola	plastid	51.81	58.01
Bra029326.1-P	Field mustard	peroxisome	49.6	57.48
CDY54797	Canola	plastid	51.41	57.3
CDY42861	Canola	peroxisome	49.4	57.24
Bra033558.1-P	Field mustard	plasma membrane	40.93	56.7
KRH39423	Soybean	plasma membrane	48.79	56.54
CDY47026	Canola	peroxisome, plastid	48.99	56.38
KRH28932	Soybean	cytosol, plasma membrane	40.73	56.11
Solyc02g082520.1.1	Tomato	cytosol, peroxisome, plasma membrane	45.77	54.18
Solyc10g048180.1.1	Tomato	plasma membrane	45.77	53.16
PGSC0003DMT400033422	Potato	plasma membrane	45.36	52.08
EER98235	Sorghum	plastid	31.85	36.74
EER93207	Sorghum	plasma membrane	29.84	34.74
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	21.37	23.93
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	21.17	22.73
KXG19641	Sorghum	plasma membrane	18.15	22.56
EES01014	Sorghum	plasma membrane	18.75	21.43
EES07657	Sorghum	plasma membrane	20.77	19.73
EES07655	Sorghum	plasma membrane	19.76	17.79
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	20.16	17.36
EER89806	Sorghum	cytosol, nucleus, plasma membrane	19.96	17.34
EES06091	Sorghum	plasma membrane	19.35	16.67
KXG25873	Sorghum	plasma membrane	21.37	16.11

Protein Annotations

MapMan:24.2.3.4.4	EntrezGene:8057587	InterPro:AA_transpt_TM	UniProt:C5YE08	EnsemblPlants:EES12671	ProteinID:EES12671
ProteinID:EES12671.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0008150
GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF259
EnsemblPlantsGene:SORBI_3006G180200	unigene:Sbi.16409	TMHMM:TMhelix	UniParc:UPI0001A8769F	RefSeq:XP_002448343.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:53448741..53451080

Molecular Weight (calculated)

52579.0 Da

IEP (calculated)

8.479

GRAVY (calculated)

0.640

Length

496 amino acids

Sequence
(BLAST)

001: MSTTLLKERS TALPPPPTAS ASTKRESARH EIPKIPHFCG HQLATPHSQS PPQLVPCSVR LIQRLNPQTT MGFDKEASSS SSRLDAAPLL PQHGLHGGGG
101: GGGHLSSQPK TFANVFIAVV GSGVLGLPYT FSRTGWAAGT LLLLAVAALT FHCMMLLVAT RRRIADEHPK IASFGDLGHA VYGAPGRHAV DAMLVLSQAS
201: FCVGYLIFIS NTMAHLYPIG AESPASPLLT AKALFIWAML PFQLGLNSIK TLTLLAPLSI FADVVDLGAM GVVLGQDASI WLANKPPVFA FAGPAELLYG
301: LGVAVYAFEG IGMVLPLEAE AADKRRFGAT LALSMAFIAV MYGLFGAMGY LAFGAATRDI ITTNLGTGWL SVLVQLGLCI NLFFTMPVMM NPVYEVAERL
401: LCGKRYAWWL RWILVVVVGL LAMLVPNFAD FLSLVGSSVC VVLGFVLPAT FHLKVFGAEI GWTGLVADVA VIVIGTVLAV SGTWTSLVQI FSSSNL

Best Arabidopsis Sequence Match ( AT4G38250.1 )
(BLAST)

001: MGFQNEASSS SYTLKIPPPA REDSPLLGKG PPLSSQFKTF ANVFIAVVGA GVLGLPYAFK RTGWLMGVLL LVSVSVLTHH CMMLLVYTRR KLDSFNAGIS
101: KIGSFGDLGF AVCGSLGRIV VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC FPFQLGLNSI KTLTHLAPLS
201: IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD
301: IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE
401: MGWLQWSSDT AIVVLGVVLA VSGTWSSLSE IFSVKV

Arabidopsis Description

AVT3CAmino acid transporter AVT3C [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.